RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 A0A1B0GVM2 712 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ANTXRLA6NF34 631 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 PATE3B3GLJ2 98 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CLDN25C9JDP6 229 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 C9JVG2 144 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 EIF3FO00303 357 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CXCR6O00574 342 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 LSM1O15116 133 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ZSCAN9O15535 394 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TLR5O60602 858 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 UGT2B11O75310 529 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 NIPSNAP2O75323 286 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 KRT6AP02538 564 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 F11P03951 625 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 KRT6BP04259 564 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 EIF2S1P05198 315 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 HMBSP08397 361 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 C1QTNF9P0C862 333 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 PRPS2P11908 318 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ITGALP20701 1170 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CDH3P22223 829 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CRHBPP24387 322 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 HOXD9P28356 352 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 GJA4P35212 333 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ZFP36L2P47974 494 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 KRT6CP48668 564 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MTPNP58546 118 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ERVPABLB-1P60509 514 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 RPL38P63173 70 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 GSTM4Q03013 218 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TAF10Q12962 218 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 DMC1Q14565 340 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 AP5B1Q2VPB7 878 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TRIM16LQ309B1 348 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 C2orf27AQ580R0 203 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CDKL4Q5MAI5 379 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 SULT1C3Q6IMI6 304 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TMEM214Q6NUQ4 689 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 KIAA1211LQ6NV74 962 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ERICH5Q6P6B1 374 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ARMCX6Q7L4S7 300 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TAS2R42Q7RTR8 314 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MILR1Q7Z6M3 343 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TMEM150AQ86TG1 271 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MICU2Q8IYU8 434 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CPA6Q8N4T0 437 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ZNF513Q8N8E2 541 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 SIDT2Q8NBJ9 832 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ZNF548Q8NEK5 533 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 OR2T11Q8NH01 316 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 PROKR1Q8TCW9 393 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 SNRNP27Q8WVK2 155 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 STARD8Q92502 1023 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 FIG4Q92562 907 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MUL1Q969V5 352 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ACDQ96AP0 544 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ITCHQ96J02 903 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TMEM74Q96NL1 305 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MUS81Q96NY9 551 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 SLC22A12Q96S37 553 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 NODALQ96S42 347 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ZNF347Q96SE7 839 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 EGFL8Q99944 293 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 SPON2Q9BUD6 331 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 THUMPD3Q9BV44 507 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CEP44Q9C0F1 390 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 GABARAPL1Q9H0R8 117 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MUC3BQ9H195 1237 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 DUSP15Q9H1R2 295 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 TOR3AQ9H497 397 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 GMPR2Q9P2T1 348 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ADGRE2Q9UHX3 823 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 FKBPLQ9UIM3 349 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ENPP5Q9UJA9 477 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 MAPRE3Q9UPY8 281 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 ERGIC3Q9Y282 383 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 DHRS7Q9Y394 339 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 RAI2Q9Y5P3 530 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 V9GYQ6 96 aa8.4□□□□□ -1.06
CTNNA1-223ENST00000520520 CHD8Q9HCK8 2581 aa8.4□□□□□ -1.07
CTNNA1-223ENST00000520520 OBSL1O75147 1896 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 A0A096LPI6 279 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 TRAV19A0A0A6YYK7 116 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 C2orf78A6NCI8 922 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 PPP6CO00743 305 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 BCKDKO14874 412 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 WNT9AO14904 365 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 MUSKO15146 869 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 FFAR2O15552 330 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 HS6ST1O60243 411 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 APBB3O95704 486 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 LATS1O95835 1130 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 TSPAN12O95859 305 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 NTRK1P04629 796 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 INHBBP09529 407 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 PIRTP0C851 137 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 EBLN1P0CF75 366 aa8.39□□□□□ -1.07
CTNNA1-223ENST00000520520 CBSLP0DN79 551 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms