RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 FAM227AF5H4B4 570 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 BTN3A3O00478 584 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 RASGRF2O14827 1237 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PRPF4O43172 522 aaKnown RBP eCLIP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 KLK8O60259 260 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 COQ9O75208 318 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TOXO94900 526 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 WNT11O96014 354 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 SERPINC1P01008 464 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 SLC4A1P02730 911 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TUBB4AP04350 444 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 HLA-DQB2P05538 268 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CYC1P08574 325 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 GSTM1P09488 218 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ZGLP1P0C6A0 271 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CCDC159P0C7I6 412 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 RALBP11234 206 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 COX6A1P12074 109 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PVRP15151 417 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 UGT1A1P22309 533 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PBLDP30039 288 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 HOXC12P31275 282 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 AKT1P31749 480 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CD68P34810 354 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TNNT3P45378 269 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 OGDHQ02218 1023 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 GSTM4Q03013 218 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF33BQ06732 778 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 KLC1Q07866 573 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 RPA4Q13156 261 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 MAMLD1Q13495 774 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PPP2R5EQ16537 467 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 DEFB113Q30KQ7 82 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 DEFB110Q30KQ9 67 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TFDP3Q5H9I0 405 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ZC3H12BQ5HYM0 836 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 FNBP1LQ5T0N5 605 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CCDC122Q5T0U0 273 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ALKBH2Q6NS38 261 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CYP4V2Q6ZWL3 525 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ACAD11Q709F0 780 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 Q71RC1 249 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 COX15Q7KZN9 410 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 KRT77Q7Z794 578 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TREML1Q86YW5 311 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 LRRC8AQ8IWT6 810 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 FAM20CQ8IXL6 584 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ADGRF3Q8IZF5 1079 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 MCOLN2Q8IZK6 566 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 DNAJC22Q8N4W6 341 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 SIRT6Q8N6T7 355 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 POGLUT1Q8NBL1 392 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 OR52E1Q8NGJ3 308 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 HEXDCQ8WVB3 486 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 NRGNQ92686 78 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 HDAC10Q969S8 669 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 UTP4Q969X6 686 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 SCMH1Q96GD3 660 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF354BQ96LW1 612 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 RMDN2Q96LZ7 410 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 FERD3LQ96RJ6 166 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PEBP4Q96S96 227 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TUBB6Q9BUF5 446 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TP63Q9H3D4 680 aaPredicted RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 DEF6Q9H4E7 631 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 MRPL47Q9HD33 250 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 FAM60AQ9NP50 221 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 LUC7LQ9NQ29 371 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 RASSF1Q9NS23 344 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 SLC22A11Q9NSA0 550 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CUTCQ9NTM9 273 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 ETNK2Q9NVF9 386 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 INTS7Q9NVH2 962 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 C14orf105Q9NVL8 296 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 DDX56Q9NY93 547 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 UTP6Q9NYH9 597 aaKnown RBP4.65□□□□□ -1.67
SDCBP-207ENST00000520168 EURLQ9NYK6 297 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 HACD3Q9P035 362 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 IFNKQ9P0W0 207 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 CTSFQ9UBX1 484 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 POLG2Q9UHN1 485 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 C3orf18Q9UK00 162 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TMPRSS11EQ9UL52 423 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 TRIM33Q9UPN9 1127 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PLEKHA6Q9Y2H5 1048 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 PKP3Q9Y446 797 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 IKBKGQ9Y6K9 419 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 HIVEP2P31629 2446 aa4.65□□□□□ -1.67
SDCBP-207ENST00000520168 IGLV3-12A0A075B6K2 115 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 IGHV1-45A0A0A0MS14 117 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FITM1A5D6W6 292 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 NKX2-6A6NCS4 301 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 TMEM191CA6NGB0 347 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 LRRC10BA6NIK2 292 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FAM90A27PA6NNH2 459 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 USP27XA6NNY8 438 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FAM47E-STBD1D6RA91 191 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms