RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 SAGP10523 405 aaPredicted RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 HTR1BP28222 390 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 ETV3P41162 512 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 BCAP31P51572 246 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 RGS8P57771 180 aaPredicted RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SMIM11AP58511 58 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 GTDC1Q4AE62 458 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 CLLU1OSQ5K130 101 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 GRASPQ7Z6J2 395 aaPredicted RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 AMZ2Q86W34 360 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SVOPLQ8N434 492 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 C7orf57Q8NEG2 295 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 TEFMQ96QE5 360 aaKnown RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SLC35A5Q9BS91 424 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 MEAF6Q9HAF1 191 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 LOC100130705A0A1B0GUX0 176 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SMIM30A4D0T7 59 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 GLOD5A6NK44 160 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 PLOD3O60568 738 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 NME6O75414 186 aaPredicted RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SYN1P17600 705 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 IDSP22304 550 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 PSMA1P25786 263 aaKnown RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 TARDBPQ13148 414 aaKnown RBP eCLIP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 TEAD2Q15562 447 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 RFTN2Q52LD8 501 aaPredicted RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 C22orf39Q6P5X5 142 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 ZZZ3Q8IYH5 903 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 RAB2BQ8WUD1 216 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 FUBP1Q96AE4 644 aaKnown RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 DPH2Q9BQC3 489 aaPredicted RBP11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SLC27A6Q9Y2P4 619 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 SESN1Q9Y6P5 492 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 BTAF1O14981 1849 aa11.39□□□□□ -0.59
SYNPO-204ENST00000519664 ZNF99A8MXY4 864 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 SOX14O95416 240 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CYP11A1P05108 521 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CLCNKAP51800 687 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 RPS13P62277 151 aaKnown RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 PCDH1Q08174 1060 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 GK3PQ14409 553 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 TAZQ16635 292 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CLEC12AQ5QGZ9 265 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 NEK10Q6ZWH5 1172 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 LGI4Q8N135 537 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 OR10G2Q8NGC3 310 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 RAB8BQ92930 207 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 SMOXQ9NWM0 555 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CRNNQ9UBG3 495 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 MALT1Q9UDY8 824 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CDC14AQ9UNH5 594 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 STX16O14662 325 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 PI15O43692 258 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 BMP10O95393 424 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 BCKDHAP12694 445 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 MAGEA6P43360 314 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 RGRP47804 291 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 ERVPABLB-1P60509 514 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 LMAN2Q12907 356 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 SEMA3AQ14563 771 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 HEPACAMQ14CZ8 416 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 FAM131AQ6UXB0 335 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 VITQ6UXI7 678 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 PRR23CQ6ZRP0 262 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 MYLIPQ8WY64 445 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 TOP1MTQ969P6 601 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CNPPD1Q9BV87 410 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 OSBPL10Q9BXB5 764 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 TAC3Q9UHF0 121 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 HMX2A2RU54 273 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 OAZ2O95190 189 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 RASGRP1O95267 797 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 ZNF10P21506 573 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CD97P48960 835 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 TAS2R50P59544 299 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 PAGE3Q5JUK9 113 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 SNAP47Q5SQN1 464 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 HLA-DQA1Q5Y7H0 255 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 FAM171BQ6P995 826 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 BLOC1S3Q6QNY0 202 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CMTR2Q8IYT2 770 aaKnown RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 SLC22A15Q8IZD6 547 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 GATA6Q92908 595 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 RERGQ96A58 199 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 C3orf14Q9HBI5 128 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 MAGEE1Q9HCI5 957 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 FARSBQ9NSD9 589 aaKnown RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CCM2LQ9NUG4 571 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 TOGARAM1Q9Y4F4 1720 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 PSIP1O75475 530 aaKnown RBP11.38□□□□□ -0.59
SYNPO-204ENST00000519664 CCNKO75909 580 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 ITGA1P56199 1179 aa11.38□□□□□ -0.59
SYNPO-204ENST00000519664 RING1Q06587 406 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms