RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 A8MUU9 505 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 DNASE2O00115 360 aaPredicted RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 GPAA1O43292 621 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 ZNF749O43361 778 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 XPOTO43592 962 aaKnown RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TUSC2O75896 110 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 MMP23AO75900 390 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 BAIAP3O94812 1187 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 CDRT1O95170 752 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 VIPP01282 170 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 PCCAP05165 728 aaPredicted RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 GNAO1P09471 354 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TSPY3P0CV98 308 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TSPY4P0CV99 314 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TSPY8P0CW00 308 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TSPY10P0CW01 314 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 PCNAP12004 261 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 CYP4B1P13584 511 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 CA4P22748 312 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 ACAT1P24752 427 aaKnown RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 PKLRP30613 574 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TNFSF9P41273 254 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 CCR6P51684 374 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 FAM3BP58499 235 aaPredicted RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 RBPJQ06330 500 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 CDK18Q07002 472 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 SQLEQ14534 574 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TAB1Q15750 504 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 RPE65Q16518 533 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 SPATA46Q5T0L3 261 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 KIAA1324Q6UXG2 1013 aaKnown RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 C2orf66Q6UXQ4 117 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 Q75L30 129 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 BHLHA15Q7RTS1 189 aaPredicted RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 GRINAQ7Z429 371 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 BEST3Q8N1M1 668 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 ZCCHC9Q8N567 271 aaKnown RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TMEM104Q8NE00 496 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TRPV3Q8NET8 790 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 OR1L3Q8NH93 324 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 PLBD2Q8NHP8 589 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 PMFBP1Q8TBY8 1022 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 SNAPC3Q92966 411 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 RPUSD4Q96CM3 377 aaKnown RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 KIR2DL4Q99706 377 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 TEKT3Q9BXF9 490 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 STRADBQ9C0K7 418 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 NYXQ9GZU5 481 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 ZBP1Q9H171 429 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 HEYLQ9NQ87 328 aaPredicted RBP-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 STK32BQ9NY57 414 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 SNTG2Q9NY99 539 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 FOXJ3Q9UPW0 622 aa-1.53□□□□□ -2.65
SNORA40.16-201ENST00000517238 IGHV3-20A0A0C4DH32 117 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 TMEM202A6NGA9 273 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 K7EQG2 157 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 GRM8O00222 908 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ANKRD28O15084 1053 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SERF1AO75920 110 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 RYKP34925 604 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 RCAN1P53805 252 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 CRISP3P54108 245 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 NR1H2P55055 460 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ADARP55265 1226 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 RAB1AP62820 205 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 PAX2Q02962 417 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 FOXD4Q12950 439 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ATP1A4Q13733 1029 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 DECR1Q16698 335 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SHROOM1Q2M3G4 852 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 DEFB115Q30KQ5 88 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SLC25A53Q5H9E4 307 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ARMCX4Q5H9R4 360 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 NANOGP8Q6NSW7 305 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 TMEM179BQ7Z7N9 219 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 AACSQ86V21 672 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 CHD1LQ86WJ1 897 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 TMEM99Q8N816 258 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 THAP8Q8NA92 274 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 BEST2Q8NFU1 509 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 DIS3LQ8TF46 1054 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 WDR60Q8WVS4 1066 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 APOBEC4Q8WW27 367 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SMPDL3BQ92485 455 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 HDAC2Q92769 488 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 MYDGFQ969H8 173 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 FAM218AQ96MZ4 157 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 IL12RB2Q99665 862 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF430Q9H8G1 570 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF287Q9HBT7 754 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 MKS1Q9NXB0 559 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SMPD3Q9NY59 655 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF212Q9UDV6 495 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 FBXO9Q9UK97 447 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 ZNF346Q9UL40 294 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SCML2Q9UQR0 700 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 SLC25A15Q9Y619 301 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 HYDINQ4G0P3 5121 aa-1.54□□□□□ -2.66
SNORA40.16-201ENST00000517238 PPIAL4EA0A075B759 164 aa-1.55□□□□□ -2.66
SNORA40.16-201ENST00000517238 PPIAL4CA0A0B4J2A2 164 aa-1.55□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms