RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 NAGLUP54802 743 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 LMO4P61968 165 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 CSNK2BP67870 215 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 GCNT1Q02742 428 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 RBPJQ06330 500 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZNF273Q14593 569 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 EFTUD2Q15029 972 aaKnown RBP eCLIP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 EXT1Q16394 746 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 GPR33Q49SQ1 333 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 TCTE1Q5JU00 501 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 C6orf136Q5SQH8 315 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 C6orf163Q5TEZ5 329 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 MFSD4BQ5TF39 518 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR4A47Q6IF82 309 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 NOTUMQ6P988 496 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 TMED8Q6PL24 325 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 TMEM207Q6UWW9 146 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZBTB49Q6ZSB9 765 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ERN2Q76MJ5 926 aaKnown RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ABI3BPQ7Z7G0 1075 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 CATSPERDQ86XM0 798 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 EID3Q8N140 333 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 NME8Q8N427 588 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 RYBPQ8N488 228 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 NIPA2Q8N8Q9 360 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 CCDC89Q8N998 374 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 TMEM178AQ8NBL3 297 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 CCDC191Q8NCU4 936 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR13C3Q8NGS6 347 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 VANGL1Q8TAA9 524 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 C9orf43Q8TAL5 461 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 SEPT1Q8WYJ6 367 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 EXT2Q93063 718 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 P2RX5Q93086 422 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 RMDN1Q96DB5 314 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 OTUB1Q96FW1 271 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 LINC00479Q96M42 142 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZNF599Q96NL3 588 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZNF300Q96RE9 604 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 EGFL8Q99944 293 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 OVOL2Q9BRP0 275 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 NAA11Q9BSU3 229 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 URM1Q9BTM9 101 aaKnown RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZMYND12Q9H0C1 365 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR10A4Q9H209 315 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 ACTL8Q9H568 366 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 GSN-AS1Q9NRJ2 163 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 NFKBIL1Q9UBC1 381 aaPredicted RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 RNF150Q9ULK6 438 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 WDR37Q9Y2I8 494 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 MRPS28Q9Y2Q9 187 aaKnown RBP1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 PPP2R2CQ9Y2T4 447 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 PRSS21Q9Y6M0 314 aa1.43□□□□□ -2.18
RNU2-56P-201ENST00000516826 A0A087WUV0 522 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 A0A1W2PR80 420 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 MTMR11A4FU01 709 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 DKC1O60832 514 aaKnown RBP eCLIP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 ACSL3O95573 720 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 GGPS1O95749 300 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 ATP1B1P05026 303 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SLC2A2P11168 524 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 DARSP14868 501 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 EDNRAP25101 427 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PTAFRP25105 342 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PSMA3P25788 255 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CDC25CP30307 473 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 HLA-FP30511 346 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TIA1P31483 386 aaKnown RBP eCLIP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 NKX2-1P43699 371 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CCR10P46092 362 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SLC6A12P48065 614 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 GMPSP49915 693 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PAX9P55771 341 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 HUNKP57058 714 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 UBASH3AP57075 661 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR1D5P58170 312 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SNRPD1P62314 119 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 IRX4P78413 519 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CYCSP99999 105 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 RASGEF1BQ0VAM2 473 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TRAP1Q12931 704 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PRPF4BQ13523 1007 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TRA2AQ13595 282 aaKnown RBP eCLIP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 HNRNPDQ14103 355 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 VEZF1Q14119 521 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TRIM29Q14134 588 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 LY6DQ14210 128 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SQLEQ14534 574 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 RRS1Q15050 365 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TAB1Q15750 504 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZNF74Q16587 644 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 LPAL2Q16609 132 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PTGISQ16647 500 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SGSM1Q2NKQ1 1148 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 HLA-BQ31612 363 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 KRT39Q6A163 491 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TRIM65Q6PJ69 517 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 METTL7BQ6UX53 244 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 GPR141Q7Z602 305 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 MFN1Q8IWA4 741 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms