RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	UBE3A	Q05086	875 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CKAP4	Q07065	602 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PPP2R5C	Q13362	524 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	NAE1	Q13564	534 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZNF234	Q14588	700 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PTGIS	Q16647	500 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCDC122	Q5T0U0	273 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	DUS1L	Q6P1R4	473 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCDC91	Q7Z6B0	441 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CTAGE6	Q86UF2	777 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	GPBP1	Q86WP2	473 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CTAGE4	Q8IX94	777 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PCDH20	Q8N6Y1	951 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	NOA1	Q8NC60	698 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CADM4	Q8NFZ8	388 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	SYN2	Q92777	582 aa	Predicted RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PIGT	Q969N2	578 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	ST6GAL2	Q96JF0	529 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	RPGRIP1	Q96KN7	1286 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	FAM20A	Q96MK3	541 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	TSG101	Q99816	390 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	RANBP17	Q9H2T7	1088 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	OLFML3	Q9NRN5	406 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PANK4	Q9NVE7	773 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PSD3	Q9NYI0	1048 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	MAP3K20	Q9NYL2	800 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	CWC15	Q9P013	229 aa	Known RBP	4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	HCN3	Q9P1Z3	774 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	TRAF3IP3	Q9Y228	551 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PCDHGB3	Q9Y5G1	929 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	PATJ	Q8NI35	1801 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	DMXL1	Q9Y485	3027 aa		4.16	□□□□□ -1.74
RUFY3-215	ENST00000515479	MYO7A	Q13402	2215 aa		4.15	□□□□□ -1.74
RUFY3-215	ENST00000515479	VPS13A	Q96RL7	3174 aa		4.15	□□□□□ -1.74
RUFY3-215	ENST00000515479	GTPBP10	A4D1E9	387 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	BTNL10	A8MVZ5	291 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	C5orf67	F2Z3F1	127 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479		F5H6K3	240 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	EIF3D	O15371	548 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	MSH4	O15457	936 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	PSMD10	O75832	226 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	IPO7	O95373	1038 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	GNA14	O95837	355 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	PATE4	P0C8F1	98 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	POLR2C	P19387	275 aa	Predicted RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	MUT	P22033	750 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	ANXA13	P27216	316 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	OAS2	P29728	719 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	CTNNB1	P35222	781 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	PSMC2	P35998	433 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	STAT2	P52630	851 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	ZNF131	P52739	623 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	DRG2	P55039	364 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	DEFB103A	P81534	67 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	FKBP3	Q00688	224 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	KLRC3	Q07444	240 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	FOXD4	Q12950	439 aa	Predicted RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	GIT2	Q14161	759 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	ANGPT1	Q15389	498 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	DUSP28	Q4G0W2	176 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	FAM171B	Q6P995	826 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	QSOX2	Q6ZRP7	698 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	KIAA1328	Q86T90	577 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	CATSPER3	Q86XQ3	398 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	CCDC65	Q8IXS2	484 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	CPXCR1	Q8N123	301 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	SYT2	Q8N9I0	419 aa	Predicted RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	ADAD2	Q8NCV1	583 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	TRIM58	Q8NG06	486 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	OR6J1	Q8NGC5	347 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	ERMN	Q8TAM6	284 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	TRIM63	Q969Q1	353 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	ORAI1	Q96D31	301 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	EEF2KMT	Q96G04	330 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	C17orf77	Q96MU5	243 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	QRFPR	Q96P65	431 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	CDCA3	Q99618	268 aa	Predicted RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	FAM110A	Q9BQ89	295 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	IFIH1	Q9BYX4	1025 aa	Known RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	PLEKHA4	Q9H4M7	779 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	TUFT1	Q9NNX1	390 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	SIX2	Q9NPC8	291 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	FBXL5	Q9UKA1	691 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	GUCA1B	Q9UMX6	200 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	SNX12	Q9UMY4	172 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	TFR2	Q9UP52	801 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	KCNK7	Q9Y2U2	307 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	JRKL	Q9Y4A0	524 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	TSC2	P49815	1807 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	GRIN2D	O15399	1336 aa		4.15	□□□□□ -1.75
RUFY3-215	ENST00000515479	CEP250	Q9BV73	2442 aa		4.14	□□□□□ -1.75
RUFY3-215	ENST00000515479	GAGE10	A6NGK3	116 aa		4.14	□□□□□ -1.75
RUFY3-215	ENST00000515479	TTC36	A6NLP5	189 aa		4.14	□□□□□ -1.75
RUFY3-215	ENST00000515479	RSPH10B2	B2RC85	870 aa		4.14	□□□□□ -1.75
RUFY3-215	ENST00000515479	BLOC1S5-TXNDC5	H3BN57	136 aa		4.14	□□□□□ -1.75
RUFY3-215	ENST00000515479	IFNL4	K9M1U5	179 aa		4.14	□□□□□ -1.75

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