RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 C8GP07360 202 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 IMPA1P29218 277 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 RPL21P46778 160 aaKnown RBP23.41■■□□□ 1.34
SNF8-213ENST00000514929 ABATP80404 500 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 PDAP1Q13442 181 aaKnown RBP23.41■■□□□ 1.34
SNF8-213ENST00000514929 STEAP4Q687X5 459 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 ADCK2Q7Z695 626 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 PAQR7Q86WK9 346 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 GPATCH11Q8N954 259 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.41■■□□□ 1.34
SNF8-213ENST00000514929 LINGO1Q96FE5 620 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 FER1L6-AS2Q96M78 137 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 CLMPQ9H6B4 373 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 ADAMTS6Q9UKP5 1117 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 PCM1Q15154 2024 aa23.41■■□□□ 1.34
SNF8-213ENST00000514929 IGKV1-8A0A0C4DH67 115 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 H0YGG7 62 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 ONECUT2O95948 504 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 OR1D4P47884 311 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 ARF3P61204 181 aaPredicted RBP23.4■■□□□ 1.34
SNF8-213ENST00000514929 PDIA2Q13087 525 aaKnown RBP23.4■■□□□ 1.34
SNF8-213ENST00000514929 ZNF425Q6IV72 752 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 COX15Q7KZN9 410 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 LRRC56Q8IYG6 542 aaPredicted RBP23.4■■□□□ 1.34
SNF8-213ENST00000514929 FDCSPQ8NFU4 85 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 WDR54Q9H977 334 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 MLXIPLQ9NP71 852 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 CCDC177Q9NQR7 707 aaPredicted RBP23.4■■□□□ 1.34
SNF8-213ENST00000514929 CORO1CQ9ULV4 474 aaPredicted RBP23.4■■□□□ 1.34
SNF8-213ENST00000514929 MAU2Q9Y6X3 613 aa23.4■■□□□ 1.34
SNF8-213ENST00000514929 CEACAM4O75871 244 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 IGHEP01854 428 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 UMODP07911 640 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 EZRP15311 586 aaKnown RBP23.39■■□□□ 1.33
SNF8-213ENST00000514929 CASQ1P31415 396 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 MRPS25P82663 173 aaKnown RBP23.39■■□□□ 1.33
SNF8-213ENST00000514929 SP140Q13342 867 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 NKG7Q16617 165 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 MUM1Q2TAK8 710 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 HECTD2Q5U5R9 776 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 FAM45BPQ6NSW5 357 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 BBOF1Q8ND07 529 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 FBXO36Q8NEA4 188 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 FAM45AQ8TCE6 357 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 COL26A1Q96A83 441 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 CABS1Q96KC9 395 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 CCDC138Q96M89 665 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 PARVBQ9HBI1 364 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 ZNF304Q9HCX3 659 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 P4HTMQ9NXG6 502 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 ZFATQ9P243 1243 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 STOX2Q9P2F5 926 aaPredicted RBP23.39■■□□□ 1.33
SNF8-213ENST00000514929 PDE10AQ9Y233 779 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 PCSK5Q92824 1860 aa23.39■■□□□ 1.33
SNF8-213ENST00000514929 CCDC88CQ9P219 2028 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 PABPN1LA6NDY0 278 aaKnown RBP23.38■■□□□ 1.33
SNF8-213ENST00000514929 TP73O15350 636 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 SLC16A5O15375 505 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 MED26O95402 600 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 IL2P60568 153 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 MGAT5Q09328 741 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 PRMT9Q6P2P2 845 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 PPP1R32Q7Z5V6 425 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 TMEM151BQ8IW70 566 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 C17orf53Q8N3J3 647 aaPredicted RBP23.38■■□□□ 1.33
SNF8-213ENST00000514929 DTWD1Q8N5C7 304 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 CSNK1A1LQ8N752 337 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 CLEC1AQ8NC01 280 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 SPATA4Q8NEY3 305 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 RERGQ96A58 199 aaPredicted RBP23.38■■□□□ 1.33
SNF8-213ENST00000514929 SLC26A1Q9H2B4 701 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 CUEDC1Q9NWM3 386 aaPredicted RBP23.38■■□□□ 1.33
SNF8-213ENST00000514929 GPR83Q9NYM4 423 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 CTSFQ9UBX1 484 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 NXT1Q9UKK6 140 aaKnown RBP23.38■■□□□ 1.33
SNF8-213ENST00000514929 VWA7Q9Y334 891 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 ZNF451Q9Y4E5 1061 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 PCDHGB7Q9Y5F8 929 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 MED13Q9UHV7 2174 aa23.38■■□□□ 1.33
SNF8-213ENST00000514929 TNRC6AQ8NDV7 1962 aaKnown RBP23.38■■□□□ 1.33
SNF8-213ENST00000514929 FAM187AA6NFU0 413 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 HIST1H2AGP0C0S8 130 aaPredicted RBP23.37■■□□□ 1.33
SNF8-213ENST00000514929 HIST1H2ADP20671 130 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 TBPL1P62380 186 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 CALCOCO2Q13137 446 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 FRG1Q14331 258 aaKnown RBP23.37■■□□□ 1.33
SNF8-213ENST00000514929 FASTKD3Q14CZ7 662 aaKnown RBP23.37■■□□□ 1.33
SNF8-213ENST00000514929 PRTGQ2VWP7 1150 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 DCAF10Q5QP82 559 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 PRAMEF13Q5VWM6 474 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 SHISA6Q6ZSJ9 500 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 MAATS1Q7Z4T9 603 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 HIST1H2AHQ96KK5 128 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 C10orf90Q96M02 699 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 SPSB2Q99619 263 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 HIST1H2AJQ99878 128 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 H2AFJQ9BTM1 129 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 NUDT9Q9BW91 350 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 DPH5Q9H2P9 285 aa23.37■■□□□ 1.33
SNF8-213ENST00000514929 SOX17Q9H6I2 414 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms