RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TXNRD3NBQ6F5E7 133 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 ARHGAP11AQ6P4F7 1023 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 ZNF449Q6P9G9 518 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 TIGD4Q8IY51 512 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 NOA1Q8NC60 698 aaKnown RBP4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 DYRK2Q92630 601 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 P2RX5Q93086 422 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 PYCR2Q96C36 320 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 FBXO17Q96EF6 278 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 ERO1AQ96HE7 468 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 C4orf45Q96LM5 186 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 NDNQ99608 321 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 ZWILCHQ9H900 591 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 GRPEL1Q9HAV7 217 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 CHST11Q9NPF2 352 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 C2orf42Q9NWW7 574 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 GRID1Q9ULK0 1009 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 CHKBQ9Y259 395 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 PYGO1Q9Y3Y4 419 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 R4GN57 208 aa4.55□□□□□ -1.68
HMGCS1-207ENST00000514610 IGHV4-4A0A075B6R2 117 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 C2CD4DB7Z1M9 353 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 HHLA1C9JL84 531 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 KLF11O14901 512 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 WDR46O15213 610 aaKnown RBP4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 LINC01565O15544 149 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 PPIP5K2O43314 1243 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 SELENOFO60613 162 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 FCGR3BO75015 233 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 GLRA3O75311 464 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 PAK4O96013 591 aaPredicted RBP4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 NR0B1P51843 470 aaKnown RBP4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 KCNJ10P78508 379 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 TRAP1Q12931 704 aaKnown RBP4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 PDLIM3Q53GG5 364 aaPredicted RBP4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 FAM166AQ6J272 317 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 CYB5D1Q6P9G0 228 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 ZNF790Q6PG37 636 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 BTNL8Q6UX41 500 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 SIX6OS1Q8N1H7 587 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 MARVELD2Q8N4S9 558 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 TMEM178AQ8NBL3 297 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 OR1L3Q8NH93 324 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 SEPT1Q8WYJ6 367 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 LRR1Q96L50 414 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 C10orf90Q96M02 699 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 PANK2Q9BZ23 570 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 SNX25Q9H3E2 840 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 ACTL8Q9H568 366 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 SCRT2Q9NQ03 307 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 TMEM181Q9P2C4 612 aa4.54□□□□□ -1.68
HMGCS1-207ENST00000514610 A0A087X002 238 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 C17orf105B2RV13 164 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 H0Y626 953 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 SLC7A4O43246 635 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 KHDRBS3O75525 346 aaKnown RBP4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 CDK2AP2O75956 126 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 LUC7L3O95232 432 aaKnown RBP4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 PGLSO95336 258 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 RAF1P04049 648 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 VIMP08670 466 aaKnown RBP4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 STAG3L1P0CL83 205 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 MYL6BP14649 208 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 ALDH4A1P30038 563 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 CRIP2P52943 208 aaPredicted RBP4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 SCN1BQ07699 218 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 PTK6Q13882 451 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 C1QTNF12Q5T7M4 302 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 NOTUMQ6P988 496 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 BTN2A1Q7KYR7 527 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 G2E3Q7L622 706 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 DCLK2Q8N568 766 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 LRTM2Q8N967 370 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 SUSD6Q92537 303 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 RIT1Q92963 219 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 KLHL5Q96PQ7 755 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 RAB9BQ9NP90 201 aa4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 INTS10Q9NVR2 710 aaKnown RBP4.53□□□□□ -1.68
HMGCS1-207ENST00000514610 SNURFLB1AK76 121 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 F8VVB4 439 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 F8VWA3 439 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 PSMD14O00487 310 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 ST8SIA3O43173 380 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 ATP1B1P05026 303 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 HMBSP08397 361 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 SUPT20HL2P0C7V6 817 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 EPORP19235 508 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 CASTP20810 708 aaKnown RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 DUTP33316 252 aaKnown RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 CDX1P47902 265 aaPredicted RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 LBX1P52954 281 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 CACNG1Q06432 222 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 CDO1Q16878 200 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 TMEM30BQ3MIR4 351 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 LCN1P1Q5VSP4 162 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 CTR9Q6PD62 1173 aa4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 PSRC1Q6PGN9 363 aaPredicted RBP4.52□□□□□ -1.69
HMGCS1-207ENST00000514610 BHLHB9Q6PI77 547 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms