RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CCSMST1Q4G0I0 132 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 THEMIS2Q5TEJ8 643 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 VASH2Q86V25 355 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 DTX1Q86Y01 620 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 ADGRF3Q8IZF5 1079 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 ZNF480Q8WV37 535 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 DLG3Q92796 817 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 PTERQ96BW5 349 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 CCDC126Q96EE4 140 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 MIPEPQ99797 713 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 HAUS8Q9BT25 410 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 CAPS2Q9BXY5 557 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 UNKQ9C0B0 810 aaKnown RBP19.43■□□□□ 0.7
USP53-208ENST00000514305 ACTR10Q9NZ32 417 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 WWOXQ9NZC7 414 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 PLA2G2EQ9NZK7 142 aa19.43■□□□□ 0.7
USP53-208ENST00000514305 J3QKU1 62 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 ATP8B1O43520 1251 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 ITGB2P05107 769 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 THRAP10827 490 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 CDH3P22223 829 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 IMPA1P29218 277 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 CMPK1P30085 196 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 CSF2RBP32927 897 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 ARL4DP49703 201 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 ATP1A2P50993 1020 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 ABATP80404 500 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 TSTA3Q13630 321 aaPredicted RBP19.42■□□□□ 0.7
USP53-208ENST00000514305 OR4D1Q15615 310 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 SLC5A12Q1EHB4 618 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 TECRLQ5HYJ1 363 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 METTL2BQ6P1Q9 378 aaKnown RBP19.42■□□□□ 0.7
USP53-208ENST00000514305 CYB5D1Q6P9G0 228 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 C4orf33Q8N1A6 199 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 PLD6Q8N2A8 252 aaKnown RBP19.42■□□□□ 0.7
USP53-208ENST00000514305 CCDC63Q8NA47 563 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 PDPRQ8NCN5 879 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 SREK1Q8WXA9 508 aaKnown RBP19.42■□□□□ 0.7
USP53-208ENST00000514305 JPH3Q8WXH2 748 aaPredicted RBP19.42■□□□□ 0.7
USP53-208ENST00000514305 RSC1A1Q92681 617 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 APOPT1Q96IL0 206 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 GPR78Q96P69 363 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 IL17FQ96PD4 163 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 TGM7Q96PF1 710 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 ATOH8Q96SQ7 321 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 MENTQ9BUN1 341 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 SSU72Q9NP77 194 aaKnown RBP19.42■□□□□ 0.7
USP53-208ENST00000514305 C1GALT1Q9NS00 363 aa19.42■□□□□ 0.7
USP53-208ENST00000514305 TLCD2A6NGC4 264 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 E7ENX8 843 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 BTN3A3O00478 584 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 RASSF9O75901 435 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 C9P02748 559 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 FGF3P11487 239 aaPredicted RBP19.41■□□□□ 0.7
USP53-208ENST00000514305 HRH2P25021 359 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 MPSTP25325 297 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 PRDX3P30048 256 aaKnown RBP19.41■□□□□ 0.7
USP53-208ENST00000514305 TAP2Q03519 686 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 GPS2Q13227 327 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 NAE1Q13564 534 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 SF1Q15637 639 aaKnown RBP19.41■□□□□ 0.7
USP53-208ENST00000514305 AGBL2Q5U5Z8 902 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 FAM129CQ86XR2 697 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 KMT5CQ86Y97 462 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 SLC22A9Q8IVM8 553 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 RDH11Q8TC12 318 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 DENND1AQ8TEH3 1009 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 EXT2Q93063 718 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 RHBDF1Q96CC6 855 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 TMBIM4Q9HC24 238 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 OGFRQ9NZT2 677 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 XPR1Q9UBH6 696 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 CIDEBQ9UHD4 219 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 POMT2Q9UKY4 750 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 PCDHGA3Q9Y5H0 932 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 MN1Q10571 1320 aaPredicted RBP19.41■□□□□ 0.7
USP53-208ENST00000514305 PIEZO2Q9H5I5 2752 aa19.41■□□□□ 0.7
USP53-208ENST00000514305 NCF1BA6NI72 391 aaPredicted RBP19.4■□□□□ 0.7
USP53-208ENST00000514305 NCF1CA8MVU1 366 aaPredicted RBP19.4■□□□□ 0.7
USP53-208ENST00000514305 DYNC1I1O14576 645 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 MAP2K7O14733 419 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 ZIC2O95409 532 aaPredicted RBP19.4■□□□□ 0.7
USP53-208ENST00000514305 NCF1P14598 390 aaPredicted RBP19.4■□□□□ 0.7
USP53-208ENST00000514305 ALDH18A1P54886 795 aaKnown RBP19.4■□□□□ 0.7
USP53-208ENST00000514305 NAA20P61599 178 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 TMTC4Q5T4D3 741 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 CACHD1Q5VU97 1274 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 SPESP1Q6UW49 350 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 THSD4Q6ZMP0 1018 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 SH2D5Q6ZV89 423 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 LINC01555Q8NAE3 123 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 OR56A3Q8NH54 315 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 EXTL1Q92935 676 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 WNT2BQ93097 391 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 DDA1Q9BW61 102 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 ASPSCR1Q9BZE9 553 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 SLC39A1Q9NY26 324 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 TMEM216Q9P0N5 145 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 TMEM9Q9P0T7 183 aa19.4■□□□□ 0.7
USP53-208ENST00000514305 CPSF2Q9P2I0 782 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms