RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	DNAJC10	Q8IXB1	793 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	SRRM1	Q8IYB3	904 aa	Known RBP	4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	BATF2	Q8N1L9	274 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	SLC16A11	Q8NCK7	471 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	EPSTI1	Q96J88	318 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	TSGA13	Q96PP4	275 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	RASL10B	Q96S79	203 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	ZMYND12	Q9H0C1	365 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	ACTL8	Q9H568	366 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	MAGEF1	Q9HAY2	307 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	GPR173	Q9NS66	373 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	SLC38A7	Q9NVC3	462 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	FAM118A	Q9NWS6	357 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	ELOVL5	Q9NYP7	299 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	SH3BGRL2	Q9UJC5	107 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	NOCT	Q9UK39	431 aa	Known RBP	4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	CCPG1	Q9ULG6	757 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	ATP6V0A2	Q9Y487	856 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	KLK4	Q9Y5K2	254 aa		4.66	□□□□□ -1.66
CALCOCO2-222	ENST00000514006	C2orf92	A0A1B0GVN3	265 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RGSL1	A5PLK6	1076 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		H0YIG0	161 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NDC80	O14777	642 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GHR	P10912	638 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ETS1	P14921	441 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CPA3	P15088	417 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SFN	P31947	248 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GMFB	P60983	142 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC34A1	Q06495	639 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PDE7A	Q13946	482 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GAMT	Q14353	236 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ACKR1	Q16570	336 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ITPRIPL2	Q3MIP1	535 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	IRAK1BP1	Q5VVH5	260 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PM20D1	Q6GTS8	502 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR4A47	Q6IF82	309 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FUT10	Q6P4F1	479 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF554	Q86TJ5	538 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ASPG	Q86U10	573 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TMEM126B	Q8IUX1	230 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MUC20	Q8N307	709 aa	Predicted RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KDM8	Q8N371	416 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCNY	Q8ND76	341 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR52E1	Q8NGJ3	308 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR10Q1	Q8NGQ4	319 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TSACC	Q96A04	125 aa	Predicted RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FAM46B	Q96A09	425 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DTD2	Q96FN9	168 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TSSK2	Q96PF2	358 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DDX50	Q9BQ39	737 aa	Known RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FAM213A	Q9BRX8	229 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	URM1	Q9BTM9	101 aa	Known RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ACPT	Q9BZG2	426 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LIN28A	Q9H9Z2	209 aa	Known RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	APOBEC3G	Q9HC16	384 aa	Known RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TCF7L2	Q9NQB0	619 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PTTG2	Q9NZH5	202 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PTGFRN	Q9P2B2	879 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SPAST	Q9UBP0	616 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TRIM10	Q9UDY6	481 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	POU2F3	Q9UKI9	436 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RALY	Q9UKM9	306 aa	Known RBP	4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TSPAN16	Q9UKR8	245 aa		4.65	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		A0A087X0K7	114 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C17orf105	B2RV13	164 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HNRNPCL2	B2RXH8	293 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC28A2	O43868	658 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TRIM16	O95361	564 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MT-ATP6	P00846	226 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CDH1	P12830	882 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	AREG	P15514	252 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FER	P16591	822 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ARF4	P18085	180 aa	Predicted RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HOXA11	P31270	313 aa	Predicted RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ARRB2	P32121	409 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NKX2-1	P43699	371 aa	Predicted RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CAMLG	P49069	296 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MBTD1	Q05BQ5	628 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CETN1	Q12798	172 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LCP2	Q13094	533 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TSTA3	Q13630	321 aa	Predicted RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	INA	Q16352	499 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HSP90AA5P	Q58FG0	334 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCNYL2	Q5T2Q4	361 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LCE4A	Q5TA78	99 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	LCE5A	Q5TCM9	118 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	AGAP6	Q5VW22	663 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NEK5	Q6P3R8	708 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TTC27	Q6P3X3	843 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ISLR2	Q6UXK2	745 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ARMC9	Q7Z3E5	817 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GPR141	Q7Z602	305 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZBTB44	Q8NCP5	570 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KCNK16	Q96T55	309 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RTP3	Q9BQQ7	232 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NYX	Q9GZU5	481 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TSPYL1	Q9H0U9	437 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms