RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FCRLBQ6BAA4 426 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 ZC3H7AQ8IWR0 971 aaKnown RBP10.36□□□□□ -0.75
DDX41-216ENST00000513562 KLHDC8BQ8IXV7 354 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 MARVELD2Q8N4S9 558 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 TMEM178AQ8NBL3 297 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 OR2L3Q8NG85 312 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 HMGCLL1Q8TB92 370 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 NPAS2Q99743 824 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 ZFYVE21Q9BQ24 234 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 UTP23Q9BRU9 249 aaKnown RBP10.36□□□□□ -0.75
DDX41-216ENST00000513562 YIPF2Q9BWQ6 316 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 C10orf88Q9H8K7 445 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 CCM2LQ9NUG4 571 aaPredicted RBP10.36□□□□□ -0.75
DDX41-216ENST00000513562 ANKRD10Q9NXR5 420 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 SLC39A10Q9ULF5 831 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 HYOU1Q9Y4L1 999 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
DDX41-216ENST00000513562 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 OR2A25A4D2G3 310 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 NKX2-6A6NCS4 301 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 SMTNL1A8MU46 457 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 H0YGG7 62 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 GPC4O75487 556 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 TOXO94900 526 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 SERPINC1P01008 464 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 CYC1P08574 325 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 HOXD4P09016 255 aaPredicted RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 PSMA3P25788 255 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 CCR7P32248 378 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 FOXN2P32314 431 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ARF3P61204 181 aaPredicted RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 HSPA14Q0VDF9 509 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 SPARCL1Q14515 664 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ASTE1Q2TB18 679 aaPredicted RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 BTBD16Q32M84 506 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 RNFT1Q5M7Z0 435 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ANKRD20A2Q5SQ80 823 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ANKRD20A1Q5TYW2 823 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ANKRD20A3Q5VUR7 823 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 CES4AQ5XG92 561 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 SPINK14Q6IE38 97 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 GALNTL5Q7Z4T8 443 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ARHGEF39Q8N4T4 335 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 FAM98AQ8NCA5 519 aaKnown RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 OR2A1Q8NGT9 310 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 LILRB4Q8NHJ6 448 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 CFAP61Q8NHU2 1237 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 STYXQ8WUJ0 223 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ASZ1Q8WWH4 475 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 ASB5Q8WWX0 329 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 IQCDQ96DY2 449 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 MIPEPQ99797 713 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 SYNPO2LQ9H987 977 aa10.35□□□□□ -0.75
DDX41-216ENST00000513562 RUVBL1Q9Y265 456 aaKnown RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 LUC7L2Q9Y383 392 aaKnown RBP10.35□□□□□ -0.75
DDX41-216ENST00000513562 MAP1AP78559 2803 aaPredicted RBP10.34□□□□□ -0.75
DDX41-216ENST00000513562 IGHV3-20A0A0C4DH32 117 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 OR51F1A6NGY5 319 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 FAM90A27PA6NNH2 459 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 H7C0C1 242 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 PSTPIP1O43586 416 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 FOXS1O43638 330 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 SPOPO43791 374 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 OR1I1O60431 355 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 NEURL1O76050 574 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 ZWINTO95229 277 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 GYPCP04921 128 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 SP1P08047 785 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 ANXA5P08758 320 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 ZNF24P17028 368 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 COMTP21964 271 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 CHRNB4P30926 498 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 ATP5OP48047 213 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 FASTKQ14296 549 aaKnown RBP10.34□□□□□ -0.75
DDX41-216ENST00000513562 NAA25Q14CX7 972 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 MEP1AQ16819 746 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 SYT16Q17RD7 645 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 GARNL3Q5VVW2 1013 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 FBXO42Q6P3S6 717 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 CEP128Q6ZU80 1094 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 CPEB2Q7Z5Q1 589 aaKnown RBP10.34□□□□□ -0.75
DDX41-216ENST00000513562 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.34□□□□□ -0.75
DDX41-216ENST00000513562 CRLF3Q8IUI8 442 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 RHOT2Q8IXI1 618 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 TAB3Q8N5C8 712 aaPredicted RBP10.34□□□□□ -0.75
DDX41-216ENST00000513562 CSNK1A1LQ8N752 337 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 FAM57AQ8TBR7 257 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 LKAAEAR1Q8TD35 194 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 METTL21AQ8WXB1 218 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 HDAC10Q969S8 669 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 MMABQ96EY8 250 aaPredicted RBP10.34□□□□□ -0.75
DDX41-216ENST00000513562 PPP1R2P1Q96PQ5 205 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 OLFM1Q99784 485 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 UCK2Q9BZX2 261 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 VN1R1Q9GZP7 353 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 KCNK13Q9HB14 408 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 SLC24A3Q9HC58 644 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 ST6GALNAC2Q9UJ37 374 aa10.34□□□□□ -0.75
DDX41-216ENST00000513562 GNPTGQ9UJJ9 305 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms