RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PPP1CAP62136 330 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 YBX1P67809 324 aaKnown RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 SH3BP2P78314 561 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 CFHR1Q03591 330 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 TRAF3Q13114 568 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 TBCCQ15814 346 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 RBBP7Q16576 425 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 ATG9BQ674R7 924 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 TTC19Q6DKK2 380 aaPredicted RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 WDR74Q6RFH5 385 aaPredicted RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 NXPE4Q6UWF7 544 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 PLXDC1Q8IUK5 500 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 L3MBTL4Q8NA19 623 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 ABHD11Q8NFV4 315 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 AGAP11Q8TF27 550 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 NCSTNQ92542 709 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 ATP6V1E2Q96A05 226 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 SORT1Q99523 831 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 LRRN3Q9H3W5 708 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 EHD1Q9H4M9 534 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 PELI2Q9HAT8 420 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 MRPS30Q9NP92 439 aaKnown RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 HAO1Q9UJM8 370 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 KLK4Q9Y5K2 254 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 IGKV1-8A0A0C4DH67 115 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 A0A0J9YY10 115 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 A0A1B0GTL3 188 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 TCP11X1B4DZS4 312 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CAPN5O15484 640 aaPredicted RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 TNFSF14O43557 240 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CLDN9O95484 217 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 C9P02748 559 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 RPLP0P05388 317 aaKnown RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 CDH1P12830 882 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 HRH2P25021 359 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CSF2RBP32927 897 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 GRIA3P42263 894 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 ACADVLP49748 655 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 ERVPABLB-1P60509 514 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CCL7P80098 99 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 IRF8Q02556 426 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CHIT1Q13231 466 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CLPPQ16740 277 aaPredicted RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 TUBB8Q3ZCM7 444 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 AMZ1Q400G9 498 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 GGTA1PQ4G0N0 100 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 XKR6Q5GH73 641 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CATSPEREQ5SY80 951 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 KIAA1614Q5VZ46 1190 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 LIPJQ5W064 366 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 IRGCQ6NXR0 463 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 LETMD1Q6P1Q0 360 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 GPRIN3Q6ZVF9 776 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 USP53Q70EK8 1073 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 MILR1Q7Z6M3 343 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 TMPRSS11BQ86T26 416 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 SYVN1Q86TM6 617 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CUZD1Q86UP6 607 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 FAM129CQ86XR2 697 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 FAM20CQ8IXL6 584 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 OR4F6Q8NGB9 312 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 OR4K1Q8NGD4 311 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 GRAMD1AQ96CP6 724 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 PTCD3Q96EY7 689 aaKnown RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 ZDHHC12Q96GR4 267 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 C7orf26Q96N11 449 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CDK15Q96Q40 435 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CD180Q99467 661 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 DPYSL5Q9BPU6 564 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 SHCBP1LQ9BZQ2 653 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 ILKAPQ9H0C8 392 aaPredicted RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 ACTR8Q9H981 624 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 SLC6A20Q9NP91 592 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 MID1IP1Q9NPA3 183 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 SLCO1B3Q9NPD5 702 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 TMEM184CQ9NVA4 438 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 CUEDC1Q9NWM3 386 aaPredicted RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 RAP2CQ9Y3L5 183 aa12.06□□□□□ -0.48
PDPN-210ENST00000513143 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
PDPN-210ENST00000513143 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 KCNE1BA0A087WTH5 132 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 H7BY64 318 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 GIPC1O14908 333 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 CASC3O15234 703 aaKnown RBP12.05□□□□□ -0.48
PDPN-210ENST00000513143 GFRA3O60609 400 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 OR4F21O95013 312 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 CPNE6O95741 557 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 FGF4P08620 206 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 CD22P20273 847 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 VARSP26640 1264 aaKnown RBP12.05□□□□□ -0.48
PDPN-210ENST00000513143 HNF4AP41235 474 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 LSSP48449 732 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 PPM1FP49593 454 aaPredicted RBP12.05□□□□□ -0.48
PDPN-210ENST00000513143 CCR8P51685 355 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 GFERP55789 205 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 CSNK1G2P78368 415 aa12.05□□□□□ -0.48
PDPN-210ENST00000513143 ILKQ13418 452 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms