RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 OR2Y1Q8NGV0 311 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 GSDMBQ8TAX9 411 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 UBE2Q2Q8WVN8 375 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 ASZ1Q8WWH4 475 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 FAM168AQ92567 244 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 NACC2Q96BF6 587 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 GBP5Q96PP8 586 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 FRMD8P1Q9BZ68 369 aaPredicted RBP6.91□□□□□ -1.3
USP46-208ENST00000512656 PLEKHB1Q9UF11 243 aaPredicted RBP6.91□□□□□ -1.3
USP46-208ENST00000512656 ANAPC5Q9UJX4 755 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 RIMKLBQ9ULI2 386 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 B3GNT3Q9Y2A9 372 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 DUSP10Q9Y6W6 482 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 CNTRLQ7Z7A1 2325 aa6.91□□□□□ -1.3
USP46-208ENST00000512656 SPENQ96T58 3664 aaKnown RBP6.91□□□□□ -1.3
USP46-208ENST00000512656 CCDC162PA2VCL2 907 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 GRID2IPA4D2P6 1211 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 APOA4P06727 396 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 PRSS56P0CW18 603 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 CBSLP0DN79 551 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 ITGAXP20702 1163 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 ADRA1DP25100 572 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 FOXN2P32314 431 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 CBSP35520 551 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 RAB28P51157 221 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 SOX8P57073 446 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 PRAMEP78395 509 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 KLF1Q13351 362 aaPredicted RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 RAPSNQ13702 412 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 TMED2Q15363 201 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 ZIC1Q15915 447 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 DEFB110Q30KQ9 67 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 FASTKD1Q53R41 847 aaKnown RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 ZC3H12BQ5HYM0 836 aaKnown RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 TCTE1Q5JU00 501 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 IRAK1BP1Q5VVH5 260 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 YOD1Q5VVQ6 348 aaPredicted RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 AADACL2Q6P093 401 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 TTC23LQ6PF05 361 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 IGFL3Q6UXB1 125 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 DCUN1D3Q8IWE4 304 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 DNAJC22Q8N4W6 341 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 RAB42Q8N4Z0 105 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 RBMXL3Q8N7X1 1067 aaKnown RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 Q8NA96 180 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 OR6P1Q8NGX9 317 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 OR4L1Q8NH43 312 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 SLC35B2Q8TB61 432 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 COG1Q8WTW3 980 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 PEX13Q92968 403 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 HDAC10Q969S8 669 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 FKBP10Q96AY3 582 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 RANBP9Q96S59 729 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 TMEM121Q9BTD3 319 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 CARD6Q9BX69 1037 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 RAB11FIP5Q9BXF6 653 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 SPRTNQ9H040 489 aaPredicted RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 ILKAPQ9H0C8 392 aaPredicted RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 FAM60AQ9NP50 221 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 CASS4Q9NQ75 786 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 P4HTMQ9NXG6 502 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 SPHK1Q9NYA1 384 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 EURLQ9NYK6 297 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 IL1RAPL1Q9NZN1 696 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 IMPACTQ9P2X3 320 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 DHCR7Q9UBM7 475 aaKnown RBP6.9□□□□□ -1.3
USP46-208ENST00000512656 SLC39A10Q9ULF5 831 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 CDYLQ9Y232 598 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 MRFAP1Q9Y605 127 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 PRSS21Q9Y6M0 314 aa6.9□□□□□ -1.3
USP46-208ENST00000512656 POLEQ07864 2286 aa6.9□□□□□ -1.31
USP46-208ENST00000512656 NBPF19A0A087WUL8 3843 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 A0A1B0GX78 115 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 OR51F1A6NGY5 319 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 TCP11X1B4DZS4 312 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 H3BMH7 237 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 AGPSO00116 658 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 KPNA5O15131 536 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 SUN1O94901 812 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 GOT2P00505 430 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 MMP11P24347 488 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 ITGA3P26006 1051 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 PKLRP30613 574 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 CD96P40200 585 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 GABRA4P48169 554 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 TTPAP49638 278 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 ZNF75DP51815 510 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 CSE1LP55060 971 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 HSPA14Q0VDF9 509 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 AIMP2Q13155 320 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 GRM7Q14831 915 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 NAA25Q14CX7 972 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 NKPD1Q17RQ9 610 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 EIF2S3LQ2VIR3 472 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 FAM214AQ32MH5 1076 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 CCDC38Q502W7 563 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 PRR30Q53SZ7 412 aaPredicted RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 TSTD2Q5T7W7 516 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 SEL1L2Q5TEA6 688 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms