RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ERP44Q9BS26 406 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ATG10Q9H0Y0 220 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ING2Q9H160 280 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 SAYSD1Q9NPB0 183 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 SMYD2Q9NRG4 433 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ZFATQ9P243 1243 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 KLK4Q9Y5K2 254 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 HELZ2Q9BYK8 2649 aaKnown RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 A6NL46 340 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 H0YGG7 62 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 J3QKU1 62 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 FFAR3O14843 346 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 HAT1O14929 419 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 GPR42O15529 346 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 SUV39H1O43463 412 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 FKBP9O95302 570 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 UMODP07911 640 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 FDXRP22570 491 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 SSTR1P30872 391 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 FOLR3P41439 243 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 RGS4P49798 205 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 ARF3P61204 181 aaPredicted RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 TBPL1P62380 186 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 SNRPNP63162 240 aaKnown RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 CALCOCO2Q13137 446 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 PDAP1Q13442 181 aaKnown RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 RAPSNQ13702 412 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 DUPD1Q68J44 220 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 ZNF425Q6IV72 752 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 TMEM207Q6UWW9 146 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 STRA8Q7Z7C7 330 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 APLFQ8IW19 511 aaPredicted RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 TTC29Q8NA56 475 aaPredicted RBP12.7□□□□□ -0.38
RNF4-215ENST00000511843 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 C10orf90Q96M02 699 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 ACSS2Q9NR19 701 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 PADI2Q9Y2J8 665 aa12.7□□□□□ -0.38
RNF4-215ENST00000511843 HYKKA2RU49 373 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 FITM1A5D6W6 292 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 ZNF839A8K0R7 811 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 CXorf49A8MYA2 514 aaPredicted RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 H7BY64 318 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 EIF3FO00303 357 aaPredicted RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 ALOX12BO75342 701 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 C8GP07360 202 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 HSD17B2P37059 387 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 ARSFP54793 590 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 IL2P60568 153 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 ZXDCQ2QGD7 858 aaPredicted RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 HKDC1Q2TB90 917 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 TCTE1Q5JU00 501 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 FAM45BPQ6NSW5 357 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 MRPL14Q6P1L8 145 aaKnown RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 ATG14Q6ZNE5 492 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 ASB18Q6ZVZ8 466 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 MAATS1Q7Z4T9 603 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 GALNT7Q86SF2 657 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 MRGPREQ86SM8 312 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 ZC3HC1Q86WB0 502 aaKnown RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 PRSS58Q8IYP2 241 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 OR2Y1Q8NGV0 311 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 FAM45AQ8TCE6 357 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 MCOLN3Q8TDD5 553 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 PRAP1Q96NZ9 151 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 MESP1Q9BRJ9 268 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 DHRS4Q9BTZ2 278 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 SOX17Q9H6I2 414 aaPredicted RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 PARVBQ9HBI1 364 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 CCDC177Q9NQR7 707 aaPredicted RBP12.69□□□□□ -0.38
RNF4-215ENST00000511843 MOCS1Q9NZB8 636 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 WHRNQ9P202 907 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 VWA7Q9Y334 891 aa12.69□□□□□ -0.38
RNF4-215ENST00000511843 SPTA1P02549 2419 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 FAM95CA0A1B0GW59 222 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 P2RX6O15547 441 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 SRPX2O60687 465 aaPredicted RBP12.68□□□□□ -0.38
RNF4-215ENST00000511843 CCNDBP1O95273 360 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 PLTPP55058 493 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 TLE1Q04724 770 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 SP140Q13342 867 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 NAE1Q13564 534 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 FRG1Q14331 258 aaKnown RBP12.68□□□□□ -0.38
RNF4-215ENST00000511843 PRTGQ2VWP7 1150 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 PRAMEF13Q5VWM6 474 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 LRRC8EQ6NSJ5 796 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 TCTN3Q6NUS6 607 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 AGTRAPQ6RW13 159 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 OVCH1Q7RTY7 1134 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 PPP1R32Q7Z5V6 425 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 CCDC25Q86WR0 208 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 PALM2Q8IXS6 379 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 CSNK1A1LQ8N752 337 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 BBOF1Q8ND07 529 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 PYROXD1Q8WU10 500 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 PYCR2Q96C36 320 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms