RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 B3GALT4O96024 378 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 MYL12AP19105 171 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 SLC15A1P46059 708 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 HK3P52790 923 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 PTPN5P54829 565 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 OLR1P78380 273 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP38-202ENST00000510377 AQP6Q13520 282 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 CADM3Q8N126 398 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 CSGALNACT1Q8TDX6 532 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 SLC32A1Q9H598 525 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 GPR83Q9NYM4 423 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 M0QX08 132 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 SOX14O95416 240 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 GATMP50440 423 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 ST3GAL4Q11206 333 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 NPRL3Q12980 569 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 IL18R1Q13478 541 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 FRG2Q64ET8 278 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 SNX20Q7Z614 316 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 CACUL1Q86Y37 369 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 TRAPPC5Q8IUR0 188 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 TRIM48Q8IWZ4 208 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 C1orf52Q8N6N3 182 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 BPIFB1Q8TDL5 484 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 IPCEF1Q8WWN9 437 aaPredicted RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 C8orf48Q96LL4 319 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 FRG2BQ96QU4 278 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 COQ7Q99807 217 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 H2AFY2Q9P0M6 372 aaPredicted RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 DLGAP4Q9Y2H0 992 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 TMED5Q9Y3A6 229 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 ANKRD31Q8N7Z5 1873 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 TPD52L2O43399 206 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 C9P02748 559 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 PPP5CP53041 499 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 GABARAPL2P60520 117 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 MVKQ03426 396 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 ELAVL2Q12926 359 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 ACOX1Q15067 660 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 ADPRMQ3LIE5 342 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 THOC7Q6I9Y2 204 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 FUT10Q6P4F1 479 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 B3GNT8Q7Z7M8 397 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 RBM23Q86U06 439 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 FAM217AQ8IXS0 508 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 RAVER1Q8IY67 606 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 ATL1Q8WXF7 558 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 GFM1Q96RP9 751 aaKnown RBP14.47□□□□□ -0.09
USP38-202ENST00000510377 PKP4Q99569 1192 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 RHNO1Q9BSD3 238 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.47□□□□□ -0.09
USP38-202ENST00000510377 NEK6Q9HC98 313 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 SSR3Q9UNL2 185 aa14.47□□□□□ -0.09
USP38-202ENST00000510377 DUSP11O75319 330 aaKnown RBP14.46□□□□□ -0.09
USP38-202ENST00000510377 RFPL2O75678 378 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 ITIH1P19827 911 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 GSTM5P46439 218 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 C2orf80Q0P641 193 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 VMACQ2NL98 169 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 HJURPQ8NCD3 748 aaPredicted RBP14.46□□□□□ -0.09
USP38-202ENST00000510377 PPCDCQ96CD2 204 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 TTPALQ9BTX7 342 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 YIPF2Q9BWQ6 316 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 RNF38Q9H0F5 515 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 CDH7Q9ULB5 785 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 A6NL46 340 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 AXIN1O15169 862 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 ADAMDEC1O15204 470 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 EBLN1P0CF75 366 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 PABPC1P11940 636 aaKnown RBP14.46□□□□□ -0.09
USP38-202ENST00000510377 CKMT1AP12532 417 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 RCVRNP35243 200 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 CREMQ03060 361 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 ATG9BQ674R7 924 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 PTRH1Q86Y79 214 aaKnown RBP14.46□□□□□ -0.09
USP38-202ENST00000510377 ARL14EPQ8N8R7 260 aaPredicted RBP14.46□□□□□ -0.09
USP38-202ENST00000510377 OMA1Q96E52 524 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 KCNH6Q9H252 994 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 IKZF5Q9H5V7 419 aa14.46□□□□□ -0.09
USP38-202ENST00000510377 DCAF13Q9NV06 445 aaKnown RBP14.46□□□□□ -0.09
USP38-202ENST00000510377 INHAP05111 366 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 MMP2P08253 660 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 PRPS1L1P21108 318 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 PSMA1P25786 263 aaKnown RBP14.46□□□□□ -0.1
USP38-202ENST00000510377 CD40LGP29965 261 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 RAB25P57735 213 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 CD83Q01151 205 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 DUOXA1Q1HG43 343 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.46□□□□□ -0.1
USP38-202ENST00000510377 BEND5Q7L4P6 421 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 ADGRG2Q8IZP9 1017 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 ZNF548Q8NEK5 533 aaPredicted RBP14.46□□□□□ -0.1
USP38-202ENST00000510377 ZNF675Q8TD23 568 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 CLP1Q92989 425 aaKnown RBP14.46□□□□□ -0.1
USP38-202ENST00000510377 MUL1Q969V5 352 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 DUS3LQ96G46 650 aaKnown RBP14.46□□□□□ -0.1
USP38-202ENST00000510377 FEVQ99581 238 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 NECTIN3Q9NQS3 549 aa14.46□□□□□ -0.1
USP38-202ENST00000510377 ATP6V1HQ9UI12 483 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms