RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 RBM22Q9NW64 420 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPN20-221ENST00000509599 CTNND2Q9UQB3 1225 aa9.02□□□□□ -0.97
PTPN20-221ENST00000509599 NBEAL2Q6ZNJ1 2754 aa9.02□□□□□ -0.97
PTPN20-221ENST00000509599 FITM1A5D6W6 292 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 GABRR3A8MPY1 467 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 FFAR3O14843 346 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 GPR42O15529 346 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 SGTAO43765 313 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 PRMT3O60678 531 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 PDE9AO76083 593 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
PTPN20-221ENST00000509599 MAGP20916 626 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 ACVR2AP27037 513 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 PEBP1P30086 187 aaKnown RBP9.01□□□□□ -0.97
PTPN20-221ENST00000509599 CD86P42081 329 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 CDR2Q01850 454 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 OC90Q02509 493 aaPredicted RBP9.01□□□□□ -0.97
PTPN20-221ENST00000509599 MEP1AQ16819 746 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 LONRF2Q1L5Z9 754 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 GXYLT1Q4G148 440 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 DNAJC24Q6P3W2 148 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 ARHGAP11AQ6P4F7 1023 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 TMEM205Q6UW68 189 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 SHISA2Q6UWI4 295 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 ZNF227Q86WZ6 799 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 PHF13Q86YI8 300 aaPredicted RBP9.01□□□□□ -0.97
PTPN20-221ENST00000509599 PERPQ96FX8 193 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 CCM2Q9BSQ5 444 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 TUBB6Q9BUF5 446 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 THAP2Q9H0W7 228 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 OR52A5Q9H2C5 316 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 MVB12BQ9H7P6 319 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 SPO11Q9Y5K1 396 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 HEATR5BQ9P2D3 2071 aa9.01□□□□□ -0.97
PTPN20-221ENST00000509599 YLPM1P49750 1951 aaKnown RBP9.01□□□□□ -0.97
PTPN20-221ENST00000509599 ROS1P08922 2347 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 IGHV3-20A0A0C4DH32 117 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 BICDL2A1A5D9 508 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 ANKRD62A6NC57 917 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 KLHL33A6NCF5 533 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 DNAJB6O75190 326 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 SLC25A12O75746 678 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 SEC24DO94855 1032 aaPredicted RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 SUN1O94901 812 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 CALB1P05937 261 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 TPBGLP0DKB5 382 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 GRIA3P42263 894 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 ZNF165P49910 485 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 ZNF135P52742 658 aaPredicted RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 SRSF2Q01130 221 aaKnown RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 BOP1Q14137 746 aaKnown RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 CAPRIN1Q14444 709 aaKnown RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 BECN1Q14457 450 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 MESDQ14696 234 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 BTBD16Q32M84 506 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 CHRFAM7AQ494W8 412 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 PLAG1Q6DJT9 500 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 BHLHB9Q6PI77 547 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 B3GNT6Q6ZMB0 384 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 MON1BQ7L1V2 547 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 ZNF677Q86XU0 584 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 TTC29Q8NA56 475 aaPredicted RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 RELL2Q8NC24 303 aaPredicted RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 OR52N2Q8NGI0 321 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 OR5M9Q8NGP3 310 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 SMARCE1Q969G3 411 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 PIGTQ969N2 578 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 LINC00615Q96LM1 132 aaPredicted RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 KRTAP9-2Q9BYQ4 174 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 ATG10Q9H0Y0 220 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 ZWILCHQ9H900 591 aa9□□□□□ -0.97
PTPN20-221ENST00000509599 STOX2Q9P2F5 926 aaPredicted RBP9□□□□□ -0.97
PTPN20-221ENST00000509599 A0A087X1B8 175 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 HYKKA2RU49 373 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 TUBAL3A6NHL2 446 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
PTPN20-221ENST00000509599 NPIPA2E9PIF3 369 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 F8VZ95 297 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 NPIPA3F8WFD2 350 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 H3BRJ5 948 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 GAPDHSO14556 408 aaPredicted RBP8.99□□□□□ -0.97
PTPN20-221ENST00000509599 MATN3O15232 486 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 SMC2O95347 1197 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 HEXBP07686 556 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 FAM157CP0CG43 387 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 NFKB1P19838 968 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 FBLP22087 321 aaKnown RBP8.99□□□□□ -0.97
PTPN20-221ENST00000509599 MIPP30301 263 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 AKT1P31749 480 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 SHMT2P34897 504 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 NSFP46459 744 aaKnown RBP8.99□□□□□ -0.97
PTPN20-221ENST00000509599 TAZQ16635 292 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 FAM214AQ32MH5 1076 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 BCL7AQ4VC05 210 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 PDLIM3Q53GG5 364 aaPredicted RBP8.99□□□□□ -0.97
PTPN20-221ENST00000509599 TCTE1Q5JU00 501 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 PRMT9Q6P2P2 845 aa8.99□□□□□ -0.97
PTPN20-221ENST00000509599 FAM151BQ6UXP7 276 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms