RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RAB25P57735 213 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RPL10AP62906 217 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GLO1Q04760 184 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC63Q05C16 580 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GALEQ14376 348 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MROH9Q5TGP6 573 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FAM173BQ6P4H8 233 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 OVCH1Q7RTY7 1134 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DCXRQ7Z4W1 244 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ERICH1Q86X53 443 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MINDY1Q8N5J2 469 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ARRDC4Q8NCT1 418 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RBM15BQ8NDT2 890 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TRPV1Q8NER1 839 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZSWIM3Q96MP5 696 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CNTNAP3BQ96NU0 1288 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TWNKQ96RR1 684 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF559Q9BR84 538 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CNTNAP3Q9BZ76 1288 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CDCP1Q9H5V8 836 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EPHX3Q9H6B9 360 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 WDR76Q9H967 626 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DIABLOQ9NR28 239 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RNF181Q9P0P0 153 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF639Q9UID6 485 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TMEFF2Q9UIK5 374 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RPH3ALQ9UNE2 315 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 A0A0A6YYC8 382 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 KCNU1A8MYU2 1149 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 I3L1I5 382 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GRID2O43424 1007 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PDGFBP01127 241 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EGFP01133 1207 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 S100A1P23297 94 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC6A2P23975 617 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TNFRSF8P28908 595 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PTPN6P29350 595 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 HSD17B3P37058 310 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 NUMBP49757 651 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 EIF3EP60228 445 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CAP1Q01518 475 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CRYZQ08257 329 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SRSF5Q13243 272 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 USP10Q14694 798 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ARHGAP19Q14CB8 494 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TAF13Q15543 124 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 IL17AQ16552 155 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZBTB37Q5TC79 503 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SERTAD4-AS1Q5TG53 156 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 METAP1DQ6UB28 335 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SUSD1Q6UWL2 747 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DHRS13Q6UX07 377 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM108Q6UXF1 575 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DEF8Q6ZN54 512 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TAS1R1Q7RTX1 841 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RNF144BQ7Z419 303 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DMRTC2Q8IXT2 367 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZC3H3Q8IXZ2 948 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM185AQ8NFB2 350 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 NLGN4YQ8NFZ3 816 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MYCBPAPQ8TBZ2 947 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MAGEE2Q8TD90 523 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TBCKQ8TEA7 893 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MITD1Q8WV92 249 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM125Q96AQ2 219 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CLCC1Q96S66 551 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 KXD1Q9BQD3 176 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ZPBPQ9BS86 351 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C1QTNF1Q9BXJ1 281 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 C12orf4Q9NQ89 552 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 STEAP1Q9UHE8 339 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FAF1Q9UNN5 650 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CCL27Q9Y4X3 112 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 USH1CQ9Y6N9 552 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 DOCK5Q9H7D0 1870 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MAN2B1O00754 1011 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 KAT7O95251 611 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 AP2A1O95782 977 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GNA14O95837 355 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RPS17P08708 135 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 NDUFB7P17568 137 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CPOXP36551 454 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC9A3P48764 834 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 SLC7A2P52569 658 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 ADARP55265 1226 aaKnown RBP3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CXCL9Q07325 125 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PNOCQ13519 176 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 RTP5Q14D33 572 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TATDN3Q17R31 274 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 PAGE2BQ5JRK9 111 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FGD3Q5JSP0 725 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 TSTD2Q5T7W7 516 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 LYPLAL1Q5VWZ2 237 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 FCRLBQ6BAA4 426 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 WBP2NLQ6ICG8 309 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 MFSD5Q6N075 450 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 GLB1LQ6UWU2 654 aa3.81□□□□□ -1.8
NEDD4-209ENST00000508871 CYP2R1Q6VVX0 501 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms