RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CCDC60Q8IWA6 550 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TBC1D21Q8IYX1 336 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MMP21Q8N119 569 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PARP8Q8N3A8 854 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SFRP1Q8N474 314 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM71DQ8N9W8 422 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 KIAA0895Q8NCT3 520 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MCOLN3Q8TDD5 553 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TCP10LQ8TDR4 215 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 WIPF2Q8TF74 440 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 POP5Q969H6 163 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 NCLNQ969V3 563 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 OMA1Q96E52 524 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MAELQ96JY0 434 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF668Q96K58 619 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 C9orf16Q9BUW7 83 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF717Q9BY31 904 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ARHGAP39Q9C0H5 1083 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 C6orf62Q9GZU0 229 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TRPV6Q9H1D0 765 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 CHST8Q9H2A9 424 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 TP63Q9H3D4 680 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 VPS37BQ9H9H4 285 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 KCNK13Q9HB14 408 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ERVK-5Q9HDB9 667 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PNPLA8Q9NP80 782 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 NECTIN3Q9NQS3 549 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FBXO6Q9NRD1 293 aaPredicted RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 FARSBQ9NSD9 589 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 DCAF16Q9NXF7 216 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 MRPL39Q9NYK5 338 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 COL20A1Q9P218 1284 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 HMGXB4Q9UGU5 601 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 ENPP5Q9UJA9 477 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 RIMS3Q9UJD0 308 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC27A6Q9Y2P4 619 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC4A4Q9Y6R1 1079 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 A3GALT2U3KPV4 340 aa4.47□□□□□ -1.69
PDLIM5-211ENST00000508531 PRSS51A0A1B0GVH4 220 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ESYT2A0FGR8 921 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SDR42E2A6NKP2 422 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 C2CD4BA6NLJ0 364 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PDZK1P1A8MUH7 402 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 KLRF2D3W0D1 207 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 F8W810 466 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SLCO1B7G3V0H7 640 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 H0YAE9 185 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 H7C0C1 242 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 EEF2KO00418 725 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DNALI1O14645 258 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 APOL1O14791 398 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 RAD51BO15315 384 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 STX7O15400 261 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SMAD6O43541 496 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PSTPIP1O43586 416 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 EXTL3O43909 919 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 MRPS14O60783 128 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 KCNJ13O60928 360 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 NOS1APO75052 506 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TADA2AO75478 443 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 RNASEH2AO75792 299 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 CCNKO75909 580 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 BCAS2O75934 225 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DDHD2O94830 711 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SNX4O95219 450 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 NADKO95544 446 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PAHP00439 452 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PLAUP00749 431 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TNFRSF1BP20333 461 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 CCND2P30279 289 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 HPCAL1P37235 193 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TALDO1P37837 337 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DDOSTP39656 456 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 HARS2P49590 506 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 CLK1P49759 484 aaKnown RBP4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 HLCSP50747 726 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PPP5CP53041 499 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PRKAA2P54646 552 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 EPHB1P54762 984 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 AQP5P55064 265 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 RAB25P57735 213 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 GABARAPL2P60520 117 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SSTP61278 116 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 COPZ1P61923 177 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ENPEPQ07075 957 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 TRAF2Q12933 501 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 BFSP1Q12934 665 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC1A5Q15758 541 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ESCO2Q56NI9 601 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 SUSD4Q5VX71 490 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ADCK1Q86TW2 530 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DGKHQ86XP1 1220 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF677Q86XU0 584 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 HPS6Q86YV9 775 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PLCZ1Q86YW0 608 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 HERC6Q8IVU3 1022 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 YAF2Q8IY57 180 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 DEFB107AQ8IZN7 70 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PGAM4Q8N0Y7 254 aa4.46□□□□□ -1.7
PDLIM5-211ENST00000508531 PDIK1LQ8N165 341 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms