RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF595Q8IYB9 648 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 CDK20Q8IZL9 346 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 EXD1Q8NHP7 514 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 SMAP2Q8WU79 429 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 URM1Q9BTM9 101 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 EQTNQ9NQ60 294 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 ADD3Q9UEY8 706 aaKnown RBP4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 VPS28Q9UK41 221 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 KLK13Q9UKR3 277 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 PPP1R3CQ9UQK1 317 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 PPP2R2CQ9Y2T4 447 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 NEXMIFQ5QGS0 1516 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 TECPR2O15040 1411 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 TNS3Q68CZ2 1445 aa4.44□□□□□ -1.7
TOPBP1-206ENST00000508524 MAP3K5Q99683 1374 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 E9PCH4 1651 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 LOC100509620A0A075B734 347 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 CYP2A7P20853 494 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 UGT1A4P22310 534 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 PTPN3P26045 913 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 MMP12P39900 470 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 MNDAP41218 407 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 HNF4AP41235 474 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 CDH13P55290 713 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 PAX9P55771 341 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 GSCP56915 257 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 GCNT1Q02742 428 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 EPS8Q12929 822 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 HERC3Q15034 1050 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 NECTIN1Q15223 517 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 E2F5Q15329 346 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 MEA1Q16626 185 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 ODF4Q2M2E3 257 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 C15orf59Q2T9L4 293 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 PDLIM3Q53GG5 364 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 C2CD6Q53TS8 623 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 TMPRSS11BQ86T26 416 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 LRRTM1Q86UE6 522 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 ZNF622Q969S3 477 aaKnown RBP eCLIP4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 CENPTQ96BT3 561 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 ZNF300Q96RE9 604 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 USP28Q96RU2 1077 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 TEX12Q9BXU0 123 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 GKN1Q9NS71 199 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 TRIM17Q9Y577 477 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 TNS2Q63HR2 1409 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 IQGAP3Q86VI3 1631 aa4.43□□□□□ -1.7
TOPBP1-206ENST00000508524 TDRD15B5MCY1 1934 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 PLEKHH1Q9ULM0 1364 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 A0A0C4DFX4 3053 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 ENO4A6NNW6 628 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 TSPAN9O75954 239 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 DDHD2O94830 711 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 DANCRP0C864 163 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 CDH3P22223 829 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 STAT2P52630 851 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 NAIPQ13075 1403 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 CHAF1BQ13112 559 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SIM2Q14190 667 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 TNIP1Q15025 636 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 ZNF239Q16600 458 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 CA9Q16790 459 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SYT14P1Q58G82 188 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 TCTEX1D4Q5JR98 221 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SLC25A47Q6Q0C1 308 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SUSD1Q6UWL2 747 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 TMEM207Q6UWW9 146 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 NUDT13Q86X67 352 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SPAG16Q8N0X2 631 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 PRSS33Q8NF86 280 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 VANGL1Q8TAA9 524 aaPredicted RBP4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SSMEM1Q8WWF3 244 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SLC22A18Q96BI1 424 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 OMA1Q96E52 524 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 C10orf90Q96M02 699 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 DGCR6LQ9BY27 220 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 WWTR1Q9GZV5 400 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 THAP2Q9H0W7 228 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 WNT5BQ9H1J7 359 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 PEAK1Q9H792 1746 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 SLC35C2Q9NQQ7 365 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 TBC1D22BQ9NU19 505 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 STUB1Q9UNE7 303 aa4.42□□□□□ -1.7
TOPBP1-206ENST00000508524 CRYBG1Q9Y4K1 1723 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 CCDC144AA2RUR9 1427 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 DAPK1P53355 1430 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 MYOM3Q5VTT5 1437 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 RRBP1Q9P2E9 1410 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 hCG_1807616A0A1W2PRN6 198 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 GLRA3O75311 464 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 JAK1P23458 1154 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 DNASE1P24855 282 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 SHC1P29353 583 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 RPL21P46778 160 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 NOVP48745 357 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 NAP1L1P55209 391 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms