RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 ATG9BQ674R7 924 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 GTF2H2CQ6P1K8 395 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 ARHGAP22Q7Z5H3 698 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 C17orf64Q86WR6 236 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 FAM129CQ86XR2 697 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 NUDCD3Q8IVD9 361 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 CCDC63Q8NA47 563 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 KLHL6Q8WZ60 621 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 RSC1A1Q92681 617 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 PHF21BQ96EK2 531 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 IL17FQ96PD4 163 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 GATA5Q9BWX5 397 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 ATG10Q9H0Y0 220 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 ABCG4Q9H172 646 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 C12orf65Q9H3J6 166 aaKnown RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 SEMA6CQ9H3T2 930 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 PELI2Q9HAT8 420 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 ZBTB26Q9HCK0 441 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 INTS9Q9NV88 658 aaKnown RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 SPHK1Q9NYA1 384 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 PSD3Q9NYI0 1048 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 ASB1Q9Y576 335 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 KCNE1BA0A087WTH5 132 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 IGKV1-8A0A0C4DH67 115 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SERTM1A2A2V5 107 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 KRT87PA6NCN2 255 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 D6RAR5 112 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 H0YIV9 168 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 TMX2-CTNND1H3BSU7 103 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 OR7A17O14581 309 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 CLGNO14967 610 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 WDR47O94967 919 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SIX3O95343 332 aaPredicted RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 THRAP10827 490 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 EZRP15311 586 aaKnown RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 CXCR2P25025 360 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 ALDH4A1P30038 563 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 CMPK1P30085 196 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SERPINB1P30740 379 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 CSF2RBP32927 897 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 GDF5P43026 501 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 HK2P52789 917 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 OR1D5P58170 312 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 TRAF3Q13114 568 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 LAPTM5Q13571 262 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 RCN2Q14257 317 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 ATG16L1Q676U5 607 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 ARMC6Q6NXE6 501 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SUSD1Q6UWL2 747 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 GOLGA7Q7Z5G4 137 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 MTERF4Q7Z6M4 381 aaKnown RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 SLITRK4Q8IW52 837 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 FAM76AQ8TAV0 307 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 CKAP2Q8WWK9 683 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SLC5A11Q8WWX8 675 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 EXT2Q93063 718 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 NEIL2Q969S2 332 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 PYCR2Q96C36 320 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 THAP11Q96EK4 314 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 PTCD3Q96EY7 689 aaKnown RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 AHCYL2Q96HN2 611 aaKnown RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 SLC41A2Q96JW4 573 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 MAGEB18Q96M61 343 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 GFM1Q96RP9 751 aaKnown RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 SELENOSQ9BQE4 189 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 RTKNQ9BST9 563 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 EFCAB11Q9BUY7 163 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 MECRQ9BV79 373 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 ZNF768Q9H5H4 540 aaKnown RBP8.31□□□□□ -1.08
USP46-207ENST00000508499 XKR8Q9H6D3 395 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 IPPKQ9H8X2 491 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 THAP1Q9NVV9 213 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 TAC3Q9UHF0 121 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 TRPS1Q9UHF7 1281 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 PLAGL1Q9UM63 463 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
USP46-207ENST00000508499 CPED1A4D0V7 1026 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 ISM1B1AKI9 464 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 HGSO14964 777 aaPredicted RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 CCNT2O60583 730 aaKnown RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 SUPT7LO94864 414 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 CLDN9O95484 217 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 ZBTB11O95625 1053 aaPredicted RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 ESRRBO95718 433 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 RPLP0P05388 317 aaKnown RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 ENO1P06733 434 aaKnown RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 C1GALT1C1LP0DN25 315 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 POLR2CP19387 275 aaPredicted RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 AHRP35869 848 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 GRIA3P42263 894 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 CCR8P51685 355 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 ARFIP1P53367 373 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 CCL7P80098 99 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 SF1Q15637 639 aaKnown RBP8.3□□□□□ -1.08
USP46-207ENST00000508499 PAGE2BQ5JRK9 111 aa8.3□□□□□ -1.08
USP46-207ENST00000508499 MANEAQ5SRI9 462 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 406.2 ms