RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 HEPHQ9BQS7 1158 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 ELAC1Q9H777 363 aaKnown RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 HCFC1R1Q9NWW0 138 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 THUMPD1Q9NXG2 353 aaKnown RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 SCHIP1Q9P0W5 487 aaPredicted RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 RHCGQ9UBD6 479 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 TRPS1Q9UHF7 1281 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 H0YAE9 185 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 PCDH7O60245 1069 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 LEFTY1O75610 366 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 RFPL2O75678 378 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 SDC1P18827 310 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 WASP42768 502 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 PCYT1AP49585 367 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 PLA2G16P53816 162 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 RBM48Q5RL73 367 aaKnown RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMG7-214ENST00000508461 CCDC149Q6ZUS6 474 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 TCAIMQ8N3R3 496 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 MCFD2Q8NI22 146 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 P2RY13Q9BPV8 354 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 ACSL6Q9UKU0 697 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 H0Y858 1186 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 TPST2O60704 377 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 LAMP1P11279 417 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 TYRP14679 529 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 ALDH3B2P48448 385 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 PSMD8P48556 350 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 RPS13P62277 151 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 MRPL58Q14197 206 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 SMN1Q16637 294 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 TNFAIP8L2Q6P589 184 aaPredicted RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 SPRED1Q7Z699 444 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 VRK3Q8IV63 474 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 C11orf65Q8NCR3 313 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 EID2BQ96D98 161 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 KCNH6Q9H252 994 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 RUVBL1Q9Y265 456 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 KLHL33A6NCF5 533 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 SLC1A7O00341 560 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CCNDBP1O95273 360 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 VIPP01282 170 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 ALPLP05186 524 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CD247P20963 164 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 SRSF11Q05519 484 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 FAM26DQ5JW98 314 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 SLC15A4Q8N697 577 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 PDPRQ8NCN5 879 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CHCHD6Q9BRQ6 235 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CAPN10Q9HC96 672 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 PLAGL1Q9UM63 463 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 PHF24Q9UPV7 400 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CLDN25C9JDP6 229 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 E7EQ34 232 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 HLA-EP13747 358 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 UBE3AQ05086 875 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMG7-214ENST00000508461 DUOXA1Q1HG43 343 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CAPN13Q6MZZ7 669 aaPredicted RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 DEF8Q6ZN54 512 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 METTL3Q86U44 580 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 FNDC8Q8TC99 324 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 COPS4Q9BT78 406 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 SLC29A3Q9BZD2 475 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 LINC00597Q9H2U6 94 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 TPK1Q9H3S4 243 aa12.49□□□□□ -0.41
SMG7-214ENST00000508461 CACYBPQ9HB71 228 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
SMG7-214ENST00000508461 CD36P16671 472 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 LAG3P18627 525 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 ALDH6A1Q02252 535 aaKnown RBP12.48□□□□□ -0.41
SMG7-214ENST00000508461 DOC2AQ14183 400 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 C11orf91Q3C1V1 193 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 OR8H2Q8N162 312 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 GOLM1Q8NBJ4 401 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 FATE1Q969F0 183 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 TTLL2Q9BWV7 592 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 POLE4Q9NR33 117 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 ABCG2Q9UNQ0 655 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 CBFA2T3O75081 653 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 SOCS5O75159 536 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 CLPXO76031 633 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 FUT4P22083 530 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 CST5P28325 142 aaPredicted RBP12.48□□□□□ -0.41
SMG7-214ENST00000508461 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
SMG7-214ENST00000508461 KDELR2P33947 212 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 BMXP51813 675 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 CLDN8P56748 225 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 DNASE1L3Q13609 305 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 TEAD2Q15562 447 aa12.48□□□□□ -0.41
SMG7-214ENST00000508461 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
SMG7-214ENST00000508461 LILRA3Q8N6C8 439 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms