RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 FRS2Q8WU20 508 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CHTF18Q8WVB6 975 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CAPSLQ8WWF8 208 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EDARADDQ8WWZ3 215 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TP53INP1Q96A56 240 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RPL10LQ96L21 214 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CEP19Q96LK0 163 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 COL21A1Q96P44 957 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 AGAP4Q96P64 663 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RAD9AQ99638 391 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 EGFL8Q99944 293 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RTP3Q9BQQ7 232 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 COPS4Q9BT78 406 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TBCDQ9BTW9 1192 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 GABARAPL3Q9BY60 117 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CD244Q9BZW8 370 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 C6orf62Q9GZU0 229 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NUAK2Q9H093 628 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SYNDIG1Q9H7V2 258 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 CARS2Q9HA77 564 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PDFQ9HBH1 243 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 RDH14Q9HBH5 336 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 C3orf14Q9HBI5 128 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 NEK6Q9HC98 313 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SARS2Q9NP81 518 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 DYRK4Q9NR20 520 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 DIABLOQ9NR28 239 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TLR8Q9NR97 1041 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ADPRHL2Q9NX46 363 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PDP1Q9P0J1 537 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MARCH2Q9P0N8 246 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 KLHL42Q9P2K6 505 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF490Q9ULM2 529 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 ST3GAL5Q9UNP4 418 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRAPPC4Q9Y296 219 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 WBP11Q9Y2W2 641 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MED16Q9Y2X0 877 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 HCN4Q9Y3Q4 1203 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 SAMHD1Q9Y3Z3 626 aaKnown RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHB5Q9Y5E4 795 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHGB3Q9Y5G1 929 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 KLK4Q9Y5K2 254 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAGED1Q9Y5V3 778 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 LYVE1Q9Y5Y7 322 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MCM3APO60318 1980 aa4.83□□□□□ -1.64
HMGB3P16-201ENST00000508037 MYLKQ15746 1914 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 NYNRINQ9P2P1 1898 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PATJQ8NI35 1801 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC12A8A0AV02 714 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SH3D21A4FU49 640 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR6C75A6NL08 312 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLCA1A8K7I4 914 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CENPXA8MT69 81 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ADM5C9JUS6 153 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 NPIPB8E9PQR5 432 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PSMD11O00231 422 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PDHXO00330 501 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 RFXANKO14593 260 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 KDELR3O43731 214 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLDN11O75508 207 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 STK16O75716 305 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 OAZ2O95190 189 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 IFNA14P01570 189 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 IGLV3-27P01718 113 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDK1P06493 297 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HMBSP08397 361 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CNPP09543 421 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARAFP10398 606 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 BCKDHAP12694 445 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANXA8P13928 327 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ITGA2P17301 1181 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CTPS1P17812 591 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PFKLP17858 780 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ALOX12P18054 663 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CD33P20138 364 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ITGALP20701 1170 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRPS1L1P21108 318 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 TACR2P21452 398 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CD72P21854 359 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRKACGP22612 351 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ALDH4A1P30038 563 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HOXC8P31273 242 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 GGT2P36268 569 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 TGFBR2P37173 567 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DDOSTP39656 456 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HNF4AP41235 474 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PIK3CBP42338 1070 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 KIR3DL1P43629 444 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 RPS5P46782 204 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 MASP1P48740 699 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC11A2P49281 568 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLK3P49761 638 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HTR6P50406 440 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DAPP51397 102 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CLCN7P51798 805 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HK3P52790 923 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms