RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 KCNJ14Q9UNX9 436 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 GREB1LQ9C091 1923 aaPredicted RBP3.1□□□□□ -1.91
LSM6-205ENST00000507449 IGSF1Q8N6C5 1336 aa3.1□□□□□ -1.91
LSM6-205ENST00000507449 TRBV5-5A0A0J9YX44 114 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 FAM170AA1A519 330 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 YDJCA8MPS7 323 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 PMS2P5A8MQ11 134 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 PRSS46E5RG02 174 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 F8VVB4 439 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 F8VWA3 439 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 O00370 1275 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 FPGTO14772 594 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 DFFBO76075 338 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 LUC7L3O95232 432 aaKnown RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 CLPTM1O96005 669 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 RLN1P04808 185 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 PRSS1P07477 247 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 HSP90AB1P08238 724 aaKnown RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 PATE4P0C8F1 98 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 CD59P13987 128 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ATP5DP30049 168 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 CSTF2P33240 577 aaKnown RBP eCLIP3.09□□□□□ -1.91
LSM6-205ENST00000507449 YWHAHQ04917 246 aaPredicted RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 C17orf67Q0P5P2 114 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 TWISTNBQ3B726 338 aaPredicted RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 KIAA1644Q3SXP7 199 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD20A4Q4UJ75 823 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD20A8PQ5CZ79 823 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD20A2Q5SQ80 823 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD20A1Q5TYW2 823 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD20A3Q5VUR7 823 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 LYSMD4Q5XG99 296 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 UGT3A1Q6NUS8 523 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 GBP6Q6ZN66 633 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 TRMT1LQ7Z2T5 733 aaKnown RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 CUZD1Q86UP6 607 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 CREBRFQ8IUR6 639 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 KIRREL3Q8IZU9 778 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 NDUFAF2Q8N183 169 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 RYBPQ8N488 228 aaPredicted RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 SEPT1Q8WYJ6 367 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 BSCL2Q96G97 398 aaPredicted RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 VMP1Q96GC9 406 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 C4orf45Q96LM5 186 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 GDAP1L1Q96MZ0 367 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 SNX25Q9H3E2 840 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ACTL8Q9H568 366 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ATP13A3Q9H7F0 1226 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 SEPT10Q9P0V9 454 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 ITGA11Q9UKX5 1188 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 TNNQ9UQP3 1299 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 HBS1LQ9Y450 684 aaKnown RBP3.09□□□□□ -1.91
LSM6-205ENST00000507449 KLK4Q9Y5K2 254 aa3.09□□□□□ -1.91
LSM6-205ENST00000507449 OOEPA6NGQ2 149 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 MSGN1A6NI15 193 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 C17orf105B2RV13 164 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 PSMA7O14818 248 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 FMO6PO60774 539 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 FAM157CP0CG43 387 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 STAG3L1P0CL83 205 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 PRSS56P0CW18 603 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 EEF2P13639 858 aaKnown RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 EPORP19235 508 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 LHCGRP22888 699 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 CDR2Q01850 454 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 CACNG1Q06432 222 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 TRAP1Q12931 704 aaKnown RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 TAF13Q15543 124 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 C20orf194Q5TEA3 1177 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 ARHGAP17Q68EM7 881 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 ZNF770Q6IQ21 691 aaPredicted RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 PODNL1Q6PEZ8 512 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 C11orf88Q6PI97 169 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 LINC00696Q6ZRV3 163 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 SH2D5Q6ZV89 423 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 USP43Q70EL4 1123 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 HOOK3Q86VS8 718 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 DZIP1Q86YF9 867 aaKnown RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 KLHL7Q8IXQ5 586 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 SYCP3Q8IZU3 236 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 AMER3Q8N944 861 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 LRTM2Q8N967 370 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 NOA1Q8NC60 698 aaKnown RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 SAP25Q8TEE9 199 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 PTP4A1Q93096 173 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 KLHL5Q96PQ7 755 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 PI4K2AQ9BTU6 479 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 FUT8Q9BYC5 575 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 TUFT1Q9NNX1 390 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 ARGLU1Q9NWB6 273 aaPredicted RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 ARMCX3Q9UH62 379 aaPredicted RBP3.08□□□□□ -1.92
LSM6-205ENST00000507449 LIPT1Q9Y234 373 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 PPP2R2CQ9Y2T4 447 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 R4GN57 208 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 STK36Q9NRP7 1315 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 CNTNAP2Q9UHC6 1331 aa3.08□□□□□ -1.92
LSM6-205ENST00000507449 MTMR11A4FU01 709 aa3.07□□□□□ -1.92
LSM6-205ENST00000507449 BLOC1S5-TXNDC5H3BN57 136 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms