RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 LYPLAL1Q5VWZ2 237 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 DRICH1Q6PGQ1 229 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 FIGNL1Q6PIW4 674 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 C6orf15Q6UXA7 325 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 B3GNT6Q6ZMB0 384 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 CERS6Q6ZMG9 384 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 FAM92BQ6ZTR7 304 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 DET1Q7L5Y6 550 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 TAS2R42Q7RTR8 314 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 SERPINA9Q86WD7 417 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 OOSP2Q86WS3 158 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 PPP1R3BQ86XI6 285 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 MYLK4Q86YV6 388 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 D2HGDHQ8N465 521 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 KIF2BQ8N4N8 673 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ACVR1CQ8NER5 493 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 GPR150Q8NGU9 434 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 OR8K5Q8NH50 307 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 NAT14Q8WUY8 206 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 EXTL1Q92935 676 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 SLC7A6OSQ96CW6 309 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 NSL1Q96IY1 281 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 VPS50Q96JG6 964 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 DNAJC1Q96KC8 554 aaKnown RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 C12orf66Q96MD2 445 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 OR6C1Q96RD1 312 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 RANBP9Q96S59 729 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 TTC1Q99614 292 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 SIKE1Q9BRV8 207 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 SEMA4CQ9C0C4 833 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 MYLK2Q9H1R3 596 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 FAM96AQ9H5X1 160 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 DENND2DQ9H6A0 471 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 GPN2Q9H9Y4 310 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 SYTL2Q9HCH5 934 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 KCNK9Q9NPC2 374 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 STARD5Q9NSY2 213 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 NKX1-2Q9UD57 310 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ZFP69BQ9UJL9 534 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 PADI1Q9ULC6 663 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 IGHV5-51A0A0C4DH38 117 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 LOC101059948A0A1B0GTJ6 334 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 UBA6A0AVT1 1052 aaPredicted RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 HEATR9A2RTY3 570 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 TLCD2A6NGC4 264 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 IFRD1O00458 451 aaPredicted RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 TM9SF1O15321 606 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 SPAG6O75602 509 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 ZBTB11O95625 1053 aaPredicted RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 SHBGP04278 402 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PLA2G2AP14555 144 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 ITGB6P18564 788 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PBLDP30039 288 aaPredicted RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PPARGP37231 505 aaPredicted RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 STAT5AP42229 794 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 CCR10P46092 362 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 HSPA13P48723 471 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 CD97P48960 835 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 ARL4DP49703 201 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 CDKN1CP49918 316 aaPredicted RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 CYP4F2P78329 520 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 ACVR1Q04771 509 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PRKAA1Q13131 559 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 SEMA5AQ13591 1074 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 KRT33BQ14525 404 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 RCN1Q15293 331 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 TRADDQ15628 312 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 KYNUQ16719 465 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 TBCELQ5QJ74 424 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 TMTC4Q5T4D3 741 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 RNF220Q5VTB9 566 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 ARMC6Q6NXE6 501 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PACS1Q6VY07 963 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 RASGRP3Q8IV61 690 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PIANPQ8IYJ0 282 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 DNAAF3Q8N9W5 541 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 SIDT2Q8NBJ9 832 aaKnown RBP7.77□□□□□ -1.17
SCN1A-207ENST00000507401 CATSPER1Q8NEC5 780 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 OR52K1Q8NGK4 314 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 WDR60Q8WVS4 1066 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 SNF8Q96H20 258 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 LRGUKQ96M69 825 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 MAP3K3Q99759 626 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 ULBP3Q9BZM4 244 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 C1orf21Q9H246 121 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 VPS11Q9H270 941 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 OR52A5Q9H2C5 316 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 MVB12BQ9H7P6 319 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 COG4Q9H9E3 785 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 CASS4Q9NQ75 786 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 C1GALT1Q9NS00 363 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 NDE1Q9NXR1 346 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PAK5Q9P286 719 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 BCAP29Q9UHQ4 241 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 KCND3Q9UK17 655 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 RARRES3Q9UL19 164 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 PCDHGA6Q9Y5G7 932 aa7.77□□□□□ -1.17
SCN1A-207ENST00000507401 OR6C74A6NCV1 312 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms