RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ATG9BQ674R7 924 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 KIAA1211LQ6NV74 962 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 TNIP2Q8NFZ5 429 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 GANCQ8TET4 914 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 NSMCE2Q96MF7 247 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 HHIPQ96QV1 700 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 EFCAB11Q9BUY7 163 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 RPF2Q9H7B2 306 aaKnown RBP21.46■■□□□ 1.03
RNF4-207ENST00000506706 WDR26Q9H7D7 661 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 FBXL12Q9NXK8 326 aa21.46■■□□□ 1.03
RNF4-207ENST00000506706 REV3LO60673 3130 aa21.45■■□□□ 1.03
RNF4-207ENST00000506706 TRBV5-3A0A0A0MS03 114 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 GPR89AB7ZAQ6 455 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 KMOO15229 486 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 PI15O43692 258 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 GMNNO75496 209 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 SMNDC1O75940 238 aaKnown RBP eCLIP21.45■■□□□ 1.02
RNF4-207ENST00000506706 PAK4O96013 591 aaPredicted RBP21.45■■□□□ 1.02
RNF4-207ENST00000506706 GPR89BP0CG08 455 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 C1GALT1C1LP0DN25 315 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 FCGR1AP12314 374 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 FASP25445 335 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 PAGE2BQ5JRK9 111 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 C10orf62Q5T681 223 aaPredicted RBP21.45■■□□□ 1.02
RNF4-207ENST00000506706 DCUN1D3Q8IWE4 304 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 TMEM132CQ8N3T6 1108 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 OR2T12Q8NG77 320 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 SETD7Q8WTS6 366 aaKnown RBP21.45■■□□□ 1.02
RNF4-207ENST00000506706 TFGQ92734 400 aaPredicted RBP21.45■■□□□ 1.02
RNF4-207ENST00000506706 GFM2Q969S9 779 aaKnown RBP21.45■■□□□ 1.02
RNF4-207ENST00000506706 BIRC7Q96CA5 298 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 EHD1Q9H4M9 534 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 SERHLQ9NQF3 203 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 DLGAP2Q9P1A6 1054 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 CEP290O15078 2479 aa21.45■■□□□ 1.02
RNF4-207ENST00000506706 VGLL3A8MV65 326 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 GGT1P19440 569 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 TRIM23P36406 574 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 RPS21P63220 83 aaKnown RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 METRNLQ641Q3 311 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 ADNP2Q6IQ32 1131 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 DTWD1Q8N5C7 304 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 TP53I13Q8NBR0 393 aaPredicted RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 PAPD5Q8NDF8 572 aaKnown RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 PHC3Q8NDX5 983 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 OR5AR1Q8NGP9 310 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 OR10A6Q8NH74 314 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 SLC5A11Q8WWX8 675 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 C11orf24Q96F05 449 aaPredicted RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 CCDC115Q96NT0 180 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 GABRG3Q99928 467 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 MKRN2Q9H000 416 aaKnown RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 AGPAT4Q9NRZ5 378 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 SH2B3Q9UQQ2 575 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 OR1A2Q9Y585 309 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 PCDHB14Q9Y5E9 798 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 AP4B1Q9Y6B7 739 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 A6NHS1 94 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 ETHE1O95571 254 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 DNTTP04053 509 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 KIR3DL1P43629 444 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 SRSF11Q05519 484 aaKnown RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 SGCGQ13326 291 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 HTR4Q13639 388 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 FGL2Q14314 439 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 SLBPQ14493 270 aaKnown RBP eCLIP21.44■■□□□ 1.02
RNF4-207ENST00000506706 PDK3Q15120 406 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 HIST2H2ACQ16777 129 aaPredicted RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 THEMIS2Q5TEJ8 643 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 HIST2H2AA3Q6FI13 130 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 LMNTD1Q8N9Z9 388 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 IKZF5Q9H5V7 419 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 PHPT1Q9NRX4 125 aaPredicted RBP21.44■■□□□ 1.02
RNF4-207ENST00000506706 TM7SF3Q9NS93 570 aa21.44■■□□□ 1.02
RNF4-207ENST00000506706 CROCCQ5TZA2 2017 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 KLHL33A6NCF5 533 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 RPN2P04844 631 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 RPS13P62277 151 aaKnown RBP21.43■■□□□ 1.02
RNF4-207ENST00000506706 PRKCQQ04759 706 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 MTAPQ13126 283 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 LAPTM5Q13571 262 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 MAP7Q14244 749 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 GTDC1Q4AE62 458 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 SPIN4Q56A73 249 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 TMEM196Q5HYL7 178 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 NXPE4Q6UWF7 544 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 ANKRD46Q86W74 232 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 MARVELD2Q8N4S9 558 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 C1orf52Q8N6N3 182 aaKnown RBP21.43■■□□□ 1.02
RNF4-207ENST00000506706 KLK6Q92876 244 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 GBP5Q96PP8 586 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 CIB1Q99828 191 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 GEMIN8Q9NWZ8 242 aaKnown RBP21.43■■□□□ 1.02
RNF4-207ENST00000506706 INVSQ9Y283 1065 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 TPST1O60507 370 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 ANXA6P08133 673 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 HNRNPFP52597 415 aaKnown RBP21.43■■□□□ 1.02
RNF4-207ENST00000506706 C21orf58P58505 322 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 NRF1Q16656 503 aa21.43■■□□□ 1.02
RNF4-207ENST00000506706 OR4F3Q6IEY1 312 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms