RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZSCAN9O15535 394 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 MT-ND3P03897 115 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ALDOAP04075 364 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 PMS2P54278 862 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ABATP80404 500 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 CDKL1Q00532 357 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 IRF9Q00978 393 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 NAA25Q14CX7 972 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ZC3H12BQ5HYM0 836 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ZNF385CQ66K41 422 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 FBXO42Q6P3S6 717 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 FAM199XQ6PEV8 388 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ZNF517Q6ZMY9 492 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 GPR135Q8IZ08 494 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 DSELQ8IZU8 1212 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ZNF655Q8N720 491 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 DCAKDQ8WVC6 231 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ALKBH8Q96BT7 664 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 LRFN5Q96NI6 719 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 OR4K3Q96R72 315 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 GPN2Q9H9Y4 310 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 ENAMQ9NRM1 1142 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 SNX15Q9NRS6 342 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 IGSF5Q9NSI5 407 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 PADI1Q9ULC6 663 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 IGSF10Q6WRI0 2623 aa17.48■□□□□ 0.39
PDLIM7-216ENST00000506537 LOC105369274A0A096LPK9 316 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 LOC102723532A0A0G2JNH3 316 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 PABPN1LA6NDY0 278 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 POC1B-GALNT4F8VUJ3 575 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 HAT1O14929 419 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 INHBAP08476 426 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 GCAP28676 217 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 CRABP2P29373 138 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 DLSTP36957 453 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 ATP6V0D1P61421 351 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 C18orf21Q32NC0 220 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 PTCHD3Q3KNS1 767 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 LCTLQ6UWM7 567 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 RAPH1Q70E73 1250 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 CENPLQ8N0S6 344 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 OR4N4Q8N0Y3 316 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 ATL1Q8WXF7 558 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 CLIP3Q96DZ5 547 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 ZFYVE21Q9BQ24 234 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 SELENOSQ9BQE4 189 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 DHRS4Q9BTZ2 278 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 STARD5Q9NSY2 213 aa17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-216ENST00000506537 H7BY64 318 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 MEN1O00255 615 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 SLU7O95391 586 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 C2P06681 752 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 CCNYL3P0C7X3 344 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 NPPBP16860 134 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 CCND1P24385 295 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 MAGEA12P43365 314 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 KCNC1P48547 511 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 SERPINB8P50452 374 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 VSX2P58304 361 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 TGFBIQ15582 683 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 CAPN13Q6MZZ7 669 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 RHBDD2Q6NTF9 364 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 TLDC1Q6P9B6 456 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 FAM198BQ6UWH4 519 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 FRA10AC1Q70Z53 315 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 PLD3Q8IV08 490 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 KCTD4Q8WVF5 259 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 MR1Q95460 341 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 ISL2Q96A47 359 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 KIAA1191Q96A73 305 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 KIAA1143Q96AT1 154 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 RHBDF1Q96CC6 855 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 SLC45A3Q96JT2 553 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 PRAP1Q96NZ9 151 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 EGFL8Q99944 293 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 PCBD2Q9H0N5 130 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 CHST8Q9H2A9 424 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 IRAK4Q9NWZ3 460 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 DHCR7Q9UBM7 475 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 ZNF180Q9UJW8 692 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 AP1M2Q9Y6Q5 423 aa17.46■□□□□ 0.39
PDLIM7-216ENST00000506537 MDC1Q14676 2089 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 EXOC1LA0A1B0GW35 172 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 FITM1A5D6W6 292 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 NCF1BA6NI72 391 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 NCF1CA8MVU1 366 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 MED26O95402 600 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 CAPN1P07384 714 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 ANXA5P08758 320 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 LTA4HP09960 611 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 CDH1P12830 882 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 NCF1P14598 390 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 EZRP15311 586 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 MSH2P43246 934 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 CYP4F2P78329 520 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 DNASE1L3Q13609 305 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 C1orf189Q5VU69 101 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 GPR155Q7Z3F1 870 aa17.45■□□□□ 0.38
PDLIM7-216ENST00000506537 ADCK2Q7Z695 626 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms