RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 VEZF1Q14119 521 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 DUOXA1Q1HG43 343 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 MCMDC2Q4G0Z9 681 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SETMARQ53H47 684 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF789Q5FWF6 425 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 NDUFAF5Q5TEU4 345 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TATDN1Q6P1N9 297 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMEM270Q6UE05 265 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 LINGO4Q6UY18 593 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 PACS1Q6VY07 963 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RAD9BQ6WBX8 426 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ASB18Q6ZVZ8 466 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 GET4Q7L5D6 327 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ARHGAP22Q7Z5H3 698 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 NRARPQ7Z6K4 114 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 KMT5CQ86Y97 462 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 DNAJC10Q8IXB1 793 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ODF3L1Q8IXM7 274 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 CFAP206Q8IYR0 622 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 NDUFAF2Q8N183 169 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ARHGAP24Q8N264 748 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RBMXL3Q8N7X1 1067 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 THAP8Q8NA92 274 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 DBF4BQ8NFT6 615 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SPATA22Q8NHS9 363 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 B4GALNT2Q8NHY0 566 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 VANGL1Q8TAA9 524 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SPATA20Q8TB22 786 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 UBLCP1Q8WVY7 318 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMED6Q8WW62 240 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ASB5Q8WWX0 329 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RIT1Q92963 219 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 THOC1Q96FV9 657 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 HMCESQ96FZ2 354 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 PDLIM5Q96HC4 596 aaKnown RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 OXNAD1Q96HP4 312 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ABHD8Q96I13 439 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 AK8Q96MA6 479 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ATP6V0BQ99437 205 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 RAD9AQ99638 391 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF350Q9GZX5 532 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 SNX25Q9H3E2 840 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 UBTD1Q9HAC8 227 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TRPC7Q9HCX4 862 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 DNAJC4Q9NNZ3 241 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMEM161AQ9NX61 479 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 LRWD1Q9UFC0 647 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 KCNS2Q9ULS6 477 aa3.05□□□□□ -1.92
TRAPPC11-205ENST00000506426 ADCY9O60503 1353 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 FLT4P35916 1363 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PCDH11XQ9BZA7 1347 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PCDH11YQ9BZA8 1340 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 A0A0G2JNG1 304 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 A0A0G2JPF8 293 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 TEX13DA0A0J9YY54 714 aaPredicted RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 HNRNPCL3B7ZW38 293 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PPIP5K2O43314 1243 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 LDB3O75112 727 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 WDPCPO95876 746 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 GH1P01241 217 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 C9P02748 559 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 LIPFP07098 398 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 HNRNPCL4P0DMR1 293 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 P4HA1P13674 534 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 IRF2P14316 349 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 CKMT2P17540 419 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PSMB4P28070 264 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 ARRB2P32121 409 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 CTNNB1P35222 781 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 AHRP35869 848 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 FRKP42685 505 aaPredicted RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 MTCP1P56278 107 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 BRWD1-AS2P59051 145 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 KIAA1024LP59773 190 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 MAT1AQ00266 395 aaKnown RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 ITPK1Q13572 414 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 SMC1AQ14683 1233 aaKnown RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 NFATC4Q14934 902 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 KIR2DS5Q14953 304 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC39A12Q504Y0 691 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 ELFN2Q5R3F8 820 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 C11orf87Q6NUJ2 197 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 FAM171BQ6P995 826 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PLXDC2Q6UX71 529 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 GFRALQ6UXV0 394 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 KCTD9Q7L273 389 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 LONP2Q86WA8 852 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 NUDT13Q86X67 352 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMEM219Q86XT9 240 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 GPALPP1Q8IXQ4 340 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 DCP1BQ8IZD4 617 aaKnown RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 NCOA7Q8NI08 942 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 NTN5Q8WTR8 489 aaPredicted RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PIGBQ92521 554 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 PROX1Q92786 737 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 SGK494Q96LW2 274 aa3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF385AQ96PM9 386 aaKnown RBP3.04□□□□□ -1.92
TRAPPC11-205ENST00000506426 MYADMQ96S97 322 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms