RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TTTY12Q9BZ98 90 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 TGIF2Q9GZN2 237 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CDCP1Q9H5V8 836 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KCNK13Q9HB14 408 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF304Q9HCX3 659 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 SPTLC3Q9NUV7 552 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 EXOC1Q9NV70 894 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 TMEM51Q9NW97 253 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ZNHIT6Q9NWK9 470 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MED29Q9NX70 200 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KLHL28Q9NXS3 571 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 GAR1Q9NY12 217 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 IL1RAPL1Q9NZN1 696 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 STOX2Q9P2F5 926 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 HOOK1Q9UJC3 728 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KCNS2Q9ULS6 477 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 PCDHGC3Q9UN70 934 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 PCDHA7Q9UN72 937 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ICKQ9UPZ9 632 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 LAMP3Q9UQV4 416 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KLHL20Q9Y2M5 609 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 PCDHGB3Q9Y5G1 929 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 WNK2Q9Y3S1 2297 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 STAB2Q8WWQ8 2551 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ABCA13Q86UQ4 5058 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 C1orf232A0A0U1RR37 186 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 OR2W5A6NFC9 320 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 LRRC14BA6NHZ5 514 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 A8MXE2 369 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 KLRC4-KLRK1H3BQV0 150 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 DDX3XO00571 662 aaKnown RBP eCLIP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 CASKO14936 926 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 KPNA5O15131 536 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PMM2O15305 246 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 KLF4O43474 513 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 KIAA0513O60268 411 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 NRP2O60462 931 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 CTSVO60911 334 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ITGA10O75578 1167 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 CD8AP01732 235 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PRB2P02812 416 aaPredicted RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 THBDP07204 575 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 C8orf89P0DMQ9 161 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 COL6A2P12110 1019 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 VCLP18206 1134 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 MAGP20916 626 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 CTSSP25774 331 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 NDUFS1P28331 727 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 GNA15P30679 374 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 RFC1P35251 1148 aaPredicted RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 GGT5P36269 586 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SLC26A3P40879 764 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 MAGEA5P43359 124 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PCYT1AP49585 367 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 RENBPP51606 427 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 MLF1P58340 268 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 HILS1P60008 231 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 RPS4XP62701 263 aaKnown RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PPIAP62937 165 aaKnown RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 IL10RBQ08334 325 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 GRM7Q14831 915 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SLC39A14Q15043 492 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 CA9Q16790 459 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SYT16Q17RD7 645 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 BEAN1Q3B7T3 259 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ATP13A5Q4VNC0 1218 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 CCDC38Q502W7 563 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 C2CD6Q53TS8 623 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 KPRPQ5T749 579 aaPredicted RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PDPK2PQ6A1A2 396 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ALG1LQ6GMV1 187 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PRMT9Q6P2P2 845 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 FAM173BQ6P4H8 233 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PAOXQ6QHF9 649 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 UNC5AQ6ZN44 842 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF704Q6ZNC4 412 aaPredicted RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SH2D5Q6ZV89 423 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 AMIGO1Q86WK6 493 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ZDHHC17Q8IUH5 632 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 GRAMD1CQ8IYS0 662 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 TRAM1L1Q8N609 369 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SLC5A8Q8N695 610 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 TMEM251Q8N6I4 163 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 EMC1Q8N766 993 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PAF1Q8N7H5 531 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 BEND7Q8N7W2 519 aaPredicted RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 LINC00301Q8NCQ3 95 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 OR2M7Q8NG81 312 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 M1APQ8TC57 530 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ELP5Q8TE02 316 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 DENND1AQ8TEH3 1009 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 NAT14Q8WUY8 206 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 MRPL24Q96A35 216 aaKnown RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ZSCAN5AQ9BUG6 496 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 PRR14Q9BWN1 585 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 SPATA16Q9BXB7 569 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 TDRD1Q9BXT4 1180 aaKnown RBP3.09□□□□□ -1.91
TCOF1-208ENST00000506063 VN1R1Q9GZP7 353 aa3.09□□□□□ -1.91
TCOF1-208ENST00000506063 ESM1Q9NQ30 184 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms