RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 DCP1BQ8IZD4 617 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 C1orf87Q8N0U7 546 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 DENND6BQ8NEG7 585 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR13J1Q8NGT2 312 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 FBXO30Q8TB52 745 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 IRGQQ8WZA9 623 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 FIG4Q92562 907 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 N4BP2L2Q92802 583 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TANKQ92844 425 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ALG14Q96F25 216 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 CDCA5Q96FF9 252 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 DTD2Q96FN9 168 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 OXNAD1Q96HP4 312 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 EPSTI1Q96J88 318 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 SAMD8Q96LT4 415 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF778Q96MU6 729 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TSSK2Q96PF2 358 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 DCLK3Q9C098 648 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ARRDC1-AS1Q9H2J1 176 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 UBQLN3Q9H347 655 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ACTL8Q9H568 366 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM30AQ9NV96 361 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMED3Q9Y3Q3 217 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 KIF3AQ9Y496 699 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 ATAD2BQ9ULI0 1458 aa3.64□□□□□ -1.83
TRAPPC13-208ENST00000505553 PFASO15067 1338 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 PDS5AQ29RF7 1337 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SYNJ2BP-COX16A0A087WUM0 186 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 A0A087X0K7 114 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 A0A1B0GVT2 93 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 A0A1W2PRB8 838 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 WDR91A4D1P6 747 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRIM64CA6NLI5 447 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 PRSS46E5RG02 174 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 TLR4O00206 839 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MID1O15344 667 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MAGEB2O15479 319 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SCO2O43819 266 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 KCNJ13O60928 360 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 WDR1O75083 606 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 CLDN14O95500 239 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 GAS8O95995 478 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 TGFAP01135 160 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 IFNB1P01574 187 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 LIPFP07098 398 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 PGK2P07205 417 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MMP10P09238 476 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SP9P0CG40 484 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 HOXB2P14652 356 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MYOD1P15172 320 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 CKMT2P17540 419 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 JAK1P23458 1154 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ELAVL4P26378 380 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 CHRNA3P32297 505 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MMP13P45452 471 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR3A1P47881 315 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SRP54P61011 504 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 IRX4P78413 519 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF155Q12901 538 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 GTF2H2Q13888 395 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 NONOQ15233 471 aaKnown RBP eCLIP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 DUOXA1Q1HG43 343 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ODF4Q2M2E3 257 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 KLHL22Q53GT1 634 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 FASTKD1Q53R41 847 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 PXDC1Q5TGL8 231 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SUSD4Q5VX71 490 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 RAET1GQ6H3X3 334 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR6B2Q6IFH4 312 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 GTF2H2CQ6P1K8 395 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 C8orf82Q6P1X6 216 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 FUT10Q6P4F1 479 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ISLR2Q6UXK2 745 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MRPL10Q7Z7H8 261 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ASPGQ86U10 573 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 TBC1D21Q8IYX1 336 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 LGI2Q8N0V4 545 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 CCDC63Q8NA47 563 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 LEMD2Q8NC56 503 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM185AQ8NFB2 350 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC24A4Q8NFF2 622 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM216AQ8WUB2 273 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLCO4A1Q96BD0 722 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 MRPL38Q96DV4 380 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 LINGO1Q96FE5 620 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 DDX50Q9BQ39 737 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZMYND12Q9H0C1 365 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 RAB17Q9H0T7 212 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ATG10Q9H0Y0 220 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 RBM38Q9H0Z9 239 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 NGBQ9NPG2 151 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 OLFML3Q9NRN5 406 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC35D1Q9NTN3 355 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZCCHC3Q9NUD5 404 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SMARCAL1Q9NZC9 954 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 CGNQ9P2M7 1197 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 SIX4Q9UIU6 781 aa3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 NOCTQ9UK39 431 aaKnown RBP3.63□□□□□ -1.83
TRAPPC13-208ENST00000505553 DNPEPQ9ULA0 475 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms