RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CCNFP41002 786 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 OR1D4P47884 311 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 VPS41P49754 854 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 SIX1Q15475 284 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 TRIP13Q15645 432 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 RBBP7Q16576 425 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 CCSMST1Q4G0I0 132 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 CASC4Q6P4E1 433 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 ISLR2Q6UXK2 745 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 OVCH1Q7RTY7 1134 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 TMEM151BQ8IW70 566 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 CATSPER1Q8NEC5 780 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 OR1N1Q8NGS0 311 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 MFSD3Q96ES6 412 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 C14orf79Q96F83 325 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 SLC22A11Q9NSA0 550 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 DRG1Q9Y295 367 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 ZKSCAN5Q9Y2L8 839 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 MAU2Q9Y6X3 613 aa15.29■□□□□ 0.04
PDLIM7-213ENST00000505074 A0A0J9YVX5 310 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 E5RI56 91 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 NIPSNAP2O75323 286 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 NADKO95544 446 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CCDC175P0C221 793 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CHRM3P20309 590 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 ITGAXP20702 1163 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CXCR5P32302 372 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CA7P43166 264 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 NKG7Q16617 165 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 FAM214AQ32MH5 1076 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CTSL3PQ5NE16 218 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 WASHC2DQ5SRD0 308 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 RNF187Q5TA31 235 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 YOD1Q5VVQ6 348 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 DRICH1Q6PGQ1 229 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 LINC00696Q6ZRV3 163 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 PRSS58Q8IYP2 241 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CHTF18Q8WVB6 975 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 ZUFSPQ96AP4 578 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 LMF1Q96S06 567 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 ACAT2Q9BWD1 397 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CTSFQ9UBX1 484 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 ZC3H7BQ9UGR2 993 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 CRYL1Q9Y2S2 319 aa15.28■□□□□ 0.04
PDLIM7-213ENST00000505074 A0A1B0GTL3 188 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 TARM1B6A8C7 271 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 H3BMM5 538 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 CTSVO60911 334 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 UNC5CO95185 931 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 FKBP9O95302 570 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 ALBP02768 609 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 HOXB4P17483 251 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 PAMP19021 973 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 CMPK1P30085 196 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 SARNPP82979 210 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 MFAP5Q13361 173 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 INAQ16352 499 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 TUBB8Q3ZCM7 444 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 FRMPD2BQ6IN97 320 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 LRRC8BQ6P9F7 803 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 COX15Q7KZN9 410 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 CEP97Q8IW35 865 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 DTWD1Q8N5C7 304 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 OR2L3Q8NG85 312 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 THOC3Q96J01 351 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 VPS50Q96JG6 964 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 CRB3Q9BUF7 120 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 WDR54Q9H977 334 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 MRM3Q9HC36 420 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 ABCF3Q9NUQ8 709 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 SPATA7Q9P0W8 599 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 SAMD15Q9P1V8 674 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 SH3BGRL2Q9UJC5 107 aa15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 NXT1Q9UKK6 140 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-213ENST00000505074 NCOA6Q14686 2063 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-213ENST00000505074 CACNA1CQ13936 2221 aa15.27■□□□□ 0.03
PDLIM7-213ENST00000505074 TCRBV7S3A2A0A539 114 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 HYKKA2RU49 373 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 NRP2O60462 931 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 TPSB2P20231 275 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 AGAP20933 346 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 ARNTP27540 789 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 RPA3P35244 121 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 GCGRP47871 477 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 SMSP52788 366 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 CASP6P55212 293 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 ARG2P78540 354 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 CDK16Q00536 496 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 OCA2Q04671 838 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 TLE4Q04727 773 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 RBPJQ06330 500 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 GPS1Q13098 491 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 FASTKQ14296 549 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 TPSAB1Q15661 275 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 TRIM58Q8NG06 486 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 LPGAT1Q92604 370 aa15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 MTFMTQ96DP5 389 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-213ENST00000505074 CABS1Q96KC9 395 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms