RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 YY2O15391 372 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 AQP9O43315 295 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 SLC34A2O95436 690 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 PDYNP01213 254 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 CHRM5P08912 532 aaPredicted RBP10.01□□□□□ -0.81
TPM3-217ENST00000504663 C1GALT1C1LP0DN25 315 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 CCND1P24385 295 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 NDUFS1P28331 727 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 HMOX2P30519 316 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 FASLGP48023 281 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 RXRGP48443 463 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 MAZP56270 477 aaKnown RBP10.01□□□□□ -0.81
TPM3-217ENST00000504663 NCALDP61601 193 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 IRF8Q02556 426 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 SLBPQ14493 270 aaKnown RBP eCLIP10.01□□□□□ -0.81
TPM3-217ENST00000504663 KRT72Q14CN4 511 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 NAA25Q14CX7 972 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ANGPT1Q15389 498 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 CPSF6Q16630 551 aaKnown RBP eCLIP10.01□□□□□ -0.811e-6■■□□□ 14.4
TPM3-217ENST00000504663 XKR6Q5GH73 641 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 C6orf136Q5SQH8 315 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 METTL21CQ5VZV1 264 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ICE2Q659A1 982 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ZNF425Q6IV72 752 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 IL27RAQ6UWB1 636 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 EFL1Q7Z2Z2 1120 aaKnown RBP10.01□□□□□ -0.81
TPM3-217ENST00000504663 TAF8Q7Z7C8 310 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 FAM20CQ8IXL6 584 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 SLC25A45Q8N413 288 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 AFAP1L2Q8N4X5 818 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 GPR156Q8NFN8 814 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 CEP70Q8NHQ1 597 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 LMX1AQ8TE12 382 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ZDHHC1Q8WTX9 485 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ATP6V1E2Q96A05 226 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 LRRC37BQ96QE4 947 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 MIPEPQ99797 713 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 RAB11FIP5Q9BXF6 653 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 AICDAQ9GZX7 198 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ACTL8Q9H568 366 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 PELI2Q9HAT8 420 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 FSCN3Q9NQT6 498 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 ZFP69BQ9UJL9 534 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 GPR45Q9Y5Y3 372 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 COL27A1Q8IZC6 1860 aaPredicted RBP10.01□□□□□ -0.81
TPM3-217ENST00000504663 SDK1Q7Z5N4 2213 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 A0A0C4DFX4 3053 aa10.01□□□□□ -0.81
TPM3-217ENST00000504663 LY6G6EA0A0G2JKS1 128 aa10□□□□□ -0.81
TPM3-217ENST00000504663 FAM86C2PA6NEL3 165 aa10□□□□□ -0.81
TPM3-217ENST00000504663 B4DGG1 531 aa10□□□□□ -0.81
TPM3-217ENST00000504663 CLGNO14967 610 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ANKRD28O15084 1053 aa10□□□□□ -0.81
TPM3-217ENST00000504663 PPM1DO15297 605 aa10□□□□□ -0.81
TPM3-217ENST00000504663 SDC3O75056 442 aa10□□□□□ -0.81
TPM3-217ENST00000504663 KLHL18O94889 574 aa10□□□□□ -0.81
TPM3-217ENST00000504663 CBX6O95503 412 aa10□□□□□ -0.81
TPM3-217ENST00000504663 HOXB3P14651 431 aaPredicted RBP10□□□□□ -0.81
TPM3-217ENST00000504663 GNAZP19086 355 aa10□□□□□ -0.81
TPM3-217ENST00000504663 EPHA8P29322 1005 aaPredicted RBP10□□□□□ -0.81
TPM3-217ENST00000504663 SHMT2P34897 504 aa10□□□□□ -0.81
TPM3-217ENST00000504663 HNF4AP41235 474 aa10□□□□□ -0.81
TPM3-217ENST00000504663 LSSP48449 732 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ATP4BP51164 291 aa10□□□□□ -0.81
TPM3-217ENST00000504663 NEK2P51955 445 aa10□□□□□ -0.81
TPM3-217ENST00000504663 DIO3P55073 304 aa10□□□□□ -0.81
TPM3-217ENST00000504663 HNRNPKP61978 463 aaKnown RBP eCLIP10□□□□□ -0.81
TPM3-217ENST00000504663 PPP1CAP62136 330 aa10□□□□□ -0.81
TPM3-217ENST00000504663 CSNK1G2P78368 415 aa10□□□□□ -0.81
TPM3-217ENST00000504663 HMGCS1Q01581 520 aa10□□□□□ -0.81
TPM3-217ENST00000504663 MEF2AQ02078 507 aaPredicted RBP10□□□□□ -0.81
TPM3-217ENST00000504663 BNIP3Q12983 259 aa10□□□□□ -0.81
TPM3-217ENST00000504663 KLF10Q13118 480 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ELOCQ15369 112 aa10□□□□□ -0.81
TPM3-217ENST00000504663 C6orf132Q5T0Z8 1188 aa10□□□□□ -0.81
TPM3-217ENST00000504663 FRG2Q64ET8 278 aa10□□□□□ -0.81
TPM3-217ENST00000504663 TMEM26Q6ZUK4 368 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ACAD11Q709F0 780 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ZNF771Q7L3S4 317 aaPredicted RBP10□□□□□ -0.81
TPM3-217ENST00000504663 AMIGO1Q86WK6 493 aa10□□□□□ -0.81
TPM3-217ENST00000504663 FUNDC1Q8IVP5 155 aa10□□□□□ -0.81
TPM3-217ENST00000504663 DDIASQ8IXT1 998 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ANKRD53Q8N9V6 530 aa10□□□□□ -0.81
TPM3-217ENST00000504663 KYQ8NBH2 561 aa10□□□□□ -0.81
TPM3-217ENST00000504663 OR2L3Q8NG85 312 aa10□□□□□ -0.81
TPM3-217ENST00000504663 OR7G3Q8NG95 312 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ZFPM2Q8WW38 1151 aa10□□□□□ -0.81
TPM3-217ENST00000504663 SLC39A7Q92504 469 aa10□□□□□ -0.81
TPM3-217ENST00000504663 SLC7A6OSQ96CW6 309 aaPredicted RBP10□□□□□ -0.81
TPM3-217ENST00000504663 CXorf40BQ96DE9 158 aa10□□□□□ -0.81
TPM3-217ENST00000504663 MAGEB10Q96LZ2 347 aaPredicted RBP10□□□□□ -0.81
TPM3-217ENST00000504663 RILPQ96NA2 401 aa10□□□□□ -0.81
TPM3-217ENST00000504663 FRG2BQ96QU4 278 aa10□□□□□ -0.81
TPM3-217ENST00000504663 OR2A14Q96R47 310 aa10□□□□□ -0.81
TPM3-217ENST00000504663 HAUS8Q9BT25 410 aa10□□□□□ -0.81
TPM3-217ENST00000504663 EFCAB11Q9BUY7 163 aa10□□□□□ -0.81
TPM3-217ENST00000504663 SARGQ9BW04 601 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ACAT2Q9BWD1 397 aa10□□□□□ -0.81
TPM3-217ENST00000504663 BRINP2Q9C0B6 783 aa10□□□□□ -0.81
TPM3-217ENST00000504663 SLC52A3Q9NQ40 469 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 534.6 ms