RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CSTF2P33240 577 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 MLLT3P42568 568 aaPredicted RBP12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 ADAMTS20P59510 1910 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 TRA2AQ13595 282 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 GPR19Q15760 415 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 C3orf38Q5JPI3 329 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 AGBL2Q5U5Z8 902 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 PRAMEF9Q5VWM5 478 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 FAM219BQ5XKK7 198 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 ZYG11AQ6WRX3 759 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 RAB11FIP2Q7L804 512 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 C17orf64Q86WR6 236 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 KLHDC8AQ8IYD2 350 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 TEX9Q8N6V9 391 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 UBTD2Q8WUN7 234 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 NEIL2Q969S2 332 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 PMEPA1Q969W9 287 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 NSUN5Q96P11 429 aaKnown RBP12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 CTRCQ99895 268 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 MECRQ9BV79 373 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 SCNM1Q9BWG6 230 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 STRADBQ9C0K7 418 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 IQCGQ9H095 443 aaKnown RBP12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 SYNPO2LQ9H987 977 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 DNAJC11Q9NVH1 559 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 SEMA5BQ9P283 1151 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 SATB2Q9UPW6 733 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 WASF3Q9UPY6 502 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 DYRK1BQ9Y463 629 aa12.75□□□□□ -0.37
PDLIM7-212ENST00000504380 ANKRD11Q6UB99 2663 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CCDC187A0A096LP49 1063 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 FEZF1A0PJY2 475 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CCDC189A1A4V9 331 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 E7EQ34 232 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 K7EPI3 171 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 HAT1O14929 419 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CTSVO60911 334 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CCNDBP1O95273 360 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 STATHP02808 62 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 ANKRD34CP0C6C1 535 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CPA3P15088 417 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CCND1P24385 295 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 ATP5F1P24539 256 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 MAPK10P53779 464 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CSNK1G2P78368 415 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 HSD11B2P80365 405 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 FOXM1Q08050 763 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 PCBP2Q15366 365 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CCDC153Q494R4 210 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 UNC50Q53HI1 259 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 FBXO42Q6P3S6 717 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 GOLGA7Q7Z5G4 137 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 TMPRSS11BQ86T26 416 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 PAQR7Q86WK9 346 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 C10orf107Q8IVU9 208 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 D2HGDHQ8N465 521 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 ANKRD42Q8N9B4 389 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 AGBL5Q8NDL9 886 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 SLC5A11Q8WWX8 675 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 LIN37Q96GY3 246 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 PRR11Q96HE9 360 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 TMEM237Q96Q45 408 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 HAUS8Q9BT25 410 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 PCBD2Q9H0N5 130 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 STMN4Q9H169 189 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 SPNS1Q9H2V7 528 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 CNOT10Q9H9A5 744 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 APMAPQ9HDC9 416 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 MLXIPLQ9NP71 852 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 OPTCQ9UBM4 332 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 PISDQ9UG56 409 aa12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 FASNP49327 2511 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-212ENST00000504380 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 A0A0J9YVX5 310 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 WDR91A4D1P6 747 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 TMX2-CTNND1H3BSU7 103 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 STX16-NPEPL1H3BU86 382 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 E2F3O00716 465 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 STX16O14662 325 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 TOX3O15405 576 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 IPO13O94829 963 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 CCR10P46092 362 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 PRKAA2P54646 552 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 CDH13P55290 713 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ABATP80404 500 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 CYP4F3Q08477 520 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 CDC16Q13042 620 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 GTF2H2Q13888 395 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 PCLAFQ15004 111 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 PDK4Q16654 411 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 ZNF425Q6IV72 752 aa12.73□□□□□ -0.37
PDLIM7-212ENST00000504380 GTF2H2CQ6P1K8 395 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms