RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ACOX3O15254 700 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 FPR1P21462 350 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 IGFALSP35858 605 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 VEGFBP49765 207 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 DSTNP60981 165 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 GANABQ14697 944 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 NUDT13Q86X67 352 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TREML1Q86YW5 311 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 CLIP4Q8N3C7 705 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 C5orf34Q96MH7 638 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 RIOK2Q9BVS4 552 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ITPAQ9BY32 194 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 DCSTAMPQ9H295 470 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TRBV23OR9-2A0A075B6M9 112 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 UPK3BL1B0FP48 263 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 UPK3BL2E5RIL1 263 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 INPPL1O15357 1258 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ALPPP05187 535 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 GDI1P31150 447 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 HOXA11P31270 313 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 XKP51811 444 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 SLBPQ14493 270 aaKnown RBP eCLIP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 CHRNA6Q15825 494 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 SYT16Q17RD7 645 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 LRRC73Q5JTD7 316 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 PYURFQ96I23 114 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 C12orf66Q96MD2 445 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ABCG4Q9H172 646 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 PPIEQ9UNP9 301 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 MANBAO00462 879 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 KRT33AO76009 404 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 RSL1D1O76021 490 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 CNTN5O94779 1100 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 RB1P06400 928 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 CYBAP13498 195 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 CRB2Q5IJ48 1285 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 C22orf39Q6P5X5 142 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 Q6ZVU0 165 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 PLD6Q8N2A8 252 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 WDTC1Q8N5D0 677 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 OR10H4Q8NGA5 316 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 RBM18Q96H35 190 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 SMURF2Q9HAU4 748 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 DUXAA6NLW8 204 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 GIMD1P0DJR0 217 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 C1QTNF8P60827 252 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TUBA3CQ13748 450 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 MORN1Q5T089 497 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 KLHL24Q6TFL4 600 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ZNF641Q96N77 438 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TRNT1Q96Q11 434 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 CYP2S1Q96SQ9 504 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 DPEP2Q9H4A9 486 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 EHD1Q9H4M9 534 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ZCCHC3Q9NUD5 404 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 EBLN1P0CF75 366 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TFPIP10646 304 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 G6PDP11413 515 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 NDUFS1P28331 727 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 MAT2AP31153 395 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TUBA1BP68363 451 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 TUBA1AQ71U36 451 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ATCAYQ86WG3 371 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 RNF31Q96EP0 1072 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 LMLNQ96KR4 655 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 SRMSQ9H3Y6 488 aa15.74■□□□□ 0.11
HMGXB3-202ENST00000503427 IRS2Q9Y4H2 1338 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 CPSF4LA6NMK7 179 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 CREG1O75629 220 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 PRAMEF12O95522 483 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 HMGN1P05114 100 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 TYRP14679 529 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 ECHS1P30084 290 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 CSTF2P33240 577 aaKnown RBP eCLIP15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 MADCAM1Q13477 382 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 OR8H1Q8NGG4 311 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 ZFAND2BQ8WV99 257 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 HAVCR1Q96D42 359 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 KCNC2Q96PR1 638 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 RAD9AQ99638 391 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 SPIN1Q9Y657 262 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 TEX28O15482 410 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 MATN4O95460 622 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 GATMP50440 423 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 TEAD2Q15562 447 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 SLC22A18Q96BI1 424 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 GFM1Q96RP9 751 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 GPN3Q9UHW5 284 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 LOC730098B7Z3J9 87 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 LEFTY2O00292 366 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 S100GP29377 79 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 RABL3Q5HYI8 236 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 COLEC12Q5KU26 742 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 UBAP2Q5T6F2 1119 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 CYS1Q717R9 158 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 FAM129CQ86XR2 697 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 UMODL1-AS1Q8N2C9 162 aa15.73■□□□□ 0.11
HMGXB3-202ENST00000503427 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms