RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FAM20AQ96MK3 541 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 UHRF2Q96PU4 802 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 IWS1Q96ST2 819 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC2A11Q9BYW1 496 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 EGLN1Q9GZT9 426 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 FN3KQ9H479 309 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 DNAJC4Q9NNZ3 241 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SDR39U1Q9NRG7 319 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SPHK1Q9NYA1 384 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TXNDC16Q9P2K2 825 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 XPO7Q9UIA9 1087 aaKnown RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 WDR83OSQ9Y284 106 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 POMT1Q9Y6A1 747 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SMCHD1A6NHR9 2005 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 A0A1W2PPK0 400 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 HTR3EA5X5Y0 456 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ENO4A6NNW6 628 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SMIM1B2RUZ4 78 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 H0YAE9 185 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 PSMD14O00487 310 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 NDC80O14777 642 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC22A2O15244 555 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATP6V0E1O15342 81 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 RPS6KA5O75582 802 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 MOCS3O95396 460 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 GSRP00390 522 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 PNPP00491 289 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGHDP01880 384 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC4A1P02730 911 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 GBAP04062 536 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 FRMD6-AS1P0C7T7 363 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 PLA2G4BP0C869 781 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 EEF2P13639 858 aaKnown RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 EPCAMP16422 314 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 CEACAM8P31997 349 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 HSD17B3P37058 310 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ERVK11-1P61568 191 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 DLK1P80370 383 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 TAF10Q12962 218 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 TAF13Q15543 124 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 NPTX1Q15818 432 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 TYSND1Q2T9J0 566 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 LACTB2Q53H82 288 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 MPP7Q5T2T1 576 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 MOXD1Q6UVY6 613 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 CEACAM20Q6UY09 585 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 MARK2Q7KZI7 788 aaKnown RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SPATA19Q7Z5L4 167 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ABI3BPQ7Z7G0 1075 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 NLRP14Q86W24 1093 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 RYBPQ8N488 228 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 BMPERQ8N8U9 685 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANKRD20A12PQ8NF67 263 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 KBTBD8Q8NFY9 601 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR4K1Q8NGD4 311 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR10V1Q8NGI7 309 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 KCNE4Q8WWG9 221 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 PIGBQ92521 554 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 NSMAFQ92636 917 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 KRT35Q92764 455 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 PROX1Q92786 737 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATP6V0A1Q93050 837 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF524Q96C55 264 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SENP5Q96HI0 755 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM71F1Q96KD3 344 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 CCDC114Q96M63 670 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SPATA33Q96N06 139 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 DUX3Q96PT4 197 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 INTS14Q96SY0 518 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATP6V0BQ99437 205 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 FUT8Q9BYC5 575 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 MMADHCQ9H3L0 296 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 Q9H8V8 135 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SDF2L1Q9HCN8 221 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 FGF21Q9NSA1 209 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 INTS10Q9NVR2 710 aaKnown RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 DDX43Q9NXZ2 648 aaKnown RBP2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 BLOC1S6Q9UL45 172 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 STUB1Q9UNE7 303 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 SNX7Q9UNH6 387 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATP6V0A2Q9Y487 856 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 TRIM17Q9Y577 477 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 IKBKGQ9Y6K9 419 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 CACNA1FO60840 1977 aa2.21□□□□□ -2.06
HMGB1P35-201ENST00000503360 A0A087WV48 116 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 A0A0G2JLW4 131 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 A0A1W2PPW3 197 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 CASTOR2A6NHX0 329 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 C2orf81A6NN90 581 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 PMS2P5A8MQ11 134 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM86B1E9PN63 330 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MPHOSPH10O00566 681 aaKnown RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF197O14709 1029 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ARPC2O15144 300 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 PGRMC2O15173 223 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 SNX3O60493 162 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 KERAO60938 352 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATP6AP2O75787 350 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 STAM2O75886 525 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 DDHD2O94830 711 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms