RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RNASE12Q5GAN4 147 aaKnown RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 SLITRK4Q8IW52 837 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 PDCD10Q9BUL8 212 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 RACGAP1Q9H0H5 632 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 SLA2Q9H6Q3 261 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 PDLIM7Q9NR12 457 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 PTGDR2Q9Y5Y4 395 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 CSF2P04141 144 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 IFNA16P05015 189 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 NR4A2P43354 598 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 SH3BP2P78314 561 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 PITPNAQ00169 270 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 CBLBQ13191 982 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF730Q6ZMV8 503 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 GJD3Q8N144 294 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 TP63Q9H3D4 680 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 UCKL1Q9NWZ5 548 aa16.78■□□□□ 0.28
HMGXB3-201ENST00000502717 MANBAO00462 879 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 ACOT8O14734 319 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 SELPP16109 830 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 OXTRP30559 389 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 ACSL1P33121 698 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 XKP51811 444 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 CDH4P55283 916 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 SCARB2Q14108 478 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 CYP4V2Q6ZWL3 525 aaPredicted RBP16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 CHCHD4Q8N4Q1 142 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 NDNFQ8TB73 568 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 PEX13Q92968 403 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 ALPK1Q96QP1 1244 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 NAA50Q9GZZ1 169 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 TMEM45AQ9NWC5 275 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 TRPS1Q9UHF7 1281 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 PCDHGB6Q9Y5F9 930 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 PCDHGA11Q9Y5H2 935 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 FAM86C2PA6NEL3 165 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 OR2B3O76000 313 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 FGF4P08620 206 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 SPATA31D3P0C874 917 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 EFNA1P20827 205 aaPredicted RBP16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 GPX3P22352 226 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 SPATA31D4Q6ZUB0 917 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 KCTD3Q9Y597 815 aa16.77■□□□□ 0.28
HMGXB3-201ENST00000502717 DUSP11O75319 330 aaKnown RBP16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 RPL10P27635 214 aaKnown RBP16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 NAE1Q13564 534 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 C10orf62Q5T681 223 aaPredicted RBP16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 IDNKQ5T6J7 187 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 AMIGO1Q86WK6 493 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 TIFAQ96CG3 184 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 SPG21Q9NZD8 308 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 TLR6Q9Y2C9 796 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 NT5C1B-RDH14C9J2C7 533 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM72CH0Y354 149 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 EBLN1P0CF75 366 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 CRHBPP24387 322 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 CDK5R2Q13319 367 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 ADAM15Q13444 863 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM72AQ5TYM5 149 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM72DQ6L9T8 149 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 MAVSQ7Z434 540 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM72BQ86X60 149 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM20CQ8IXL6 584 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 ZNF655Q8N720 491 aaPredicted RBP16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 OR6Q1Q8NGQ2 317 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 CLEC4AQ9UMR7 237 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 STON1Q9Y6Q2 735 aa16.77■□□□□ 0.27
HMGXB3-201ENST00000502717 S1PR4O95977 384 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 GLUD1P00367 558 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 INHAP05111 366 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 RPS3P23396 243 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 IL4RP24394 825 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 MLLT6P55198 1093 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 PUDPQ08623 228 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 NPRL3Q12980 569 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 NHSL2Q5HYW2 709 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 AGAP7PQ5VUJ5 663 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 TMEM80Q96HE8 168 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 FAM120CQ9NX05 1096 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 INTS6Q9UL03 887 aaKnown RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 TRAV19A0A0A6YYK7 116 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 KIAA0513O60268 411 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 STOMP27105 288 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 MED27Q6P2C8 311 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 PSRC1Q6PGN9 363 aaPredicted RBP16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 OXR1Q8N573 874 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 OR13F1Q8NGS4 319 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 MAP10Q9P2G4 905 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 SLC27A5Q9Y2P5 690 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 USP54Q70EL1 1684 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 A0A096LPI6 279 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 OR6C75A6NL08 312 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 C12orf71A8MTZ7 269 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 ARVCFO00192 962 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 WNT9AO14904 365 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 B4GAT1O43505 415 aa16.76■□□□□ 0.27
HMGXB3-201ENST00000502717 TMPRSS11BQ86T26 416 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms