RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 KCNAB2Q13303 367 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 SGCGQ13326 291 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 C1orf61Q13536 156 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 DNASE1L3Q13609 305 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 FLOT2Q14254 428 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 PTK2BQ14289 1009 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 FZD2Q14332 565 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 CLCA4Q14CN2 919 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 GOLGA7BQ2TAP0 167 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 ZNF284Q2VY69 593 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 GFOD2Q3B7J2 385 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 BOLA3Q53S33 107 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 LDLRAP1Q5SW96 308 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 UBE2UQ5VVX9 321 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 RAP1GAP2Q684P5 730 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 ARHGAP17Q68EM7 881 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 NADSYN1Q6IA69 706 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 HMBOX1Q6NT76 420 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 DRICH1Q6PGQ1 229 aaPredicted RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 GCNT7Q6ZNI0 430 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 ZCCHC23Q6ZST2 131 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 TAS2R42Q7RTR8 314 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 MFSD4AQ8N468 514 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 IL22RA1Q8N6P7 574 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 UBR7Q8N806 425 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 SLC4A11Q8NBS3 891 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 FBXO36Q8NEA4 188 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 OR13F1Q8NGS4 319 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 UBA3Q8TBC4 463 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 TAS1R2Q8TE23 839 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 CHAC2Q8WUX2 184 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 KCTD13Q8WZ19 329 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 PEX13Q92968 403 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 FAM131CQ96AQ9 280 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 CMTM5Q96DZ9 223 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 VMP1Q96GC9 406 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 PPP1R16AQ96I34 528 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 BMFQ96LC9 184 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 TMEM121Q9BTD3 319 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 C1orf50Q9BV19 199 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 SLC17A9Q9BYT1 436 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 CPEB1Q9BZB8 566 aaKnown RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 STN1Q9H668 368 aaKnown RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 ATP13A3Q9H7F0 1226 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 ZNF71Q9NQZ8 489 aaPredicted RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 CISHQ9NSE2 258 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 ARMC1Q9NVT9 282 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 AKAP7Q9P0M2 348 aaPredicted RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 ZMAT5Q9UDW3 170 aaKnown RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 APOBEC3BQ9UH17 382 aaKnown RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 ACSL6Q9UKU0 697 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 PRPF19Q9UMS4 504 aaKnown RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 TCAF1Q9Y4C2 921 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 LOXL2Q9Y4K0 774 aa4.39□□□□□ -1.71
MATR3-202ENST00000502422 TEP1Q99973 2627 aaKnown RBP4.39□□□□□ -1.71
MATR3-202ENST00000502422 TCRBV7S3A2A0A539 114 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 FAM172BPA6NC97 362 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 ADARB2-AS1A8MUL3 147 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 CLDN25C9JDP6 229 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 TRIM77I1YAP6 450 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 CCRL2O00421 344 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 PIK3R2O00459 728 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 COPEO14579 308 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 KLF4O43474 513 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 IGLV3-27P01718 113 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 PRNPP04156 253 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 CTSEP14091 401 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 ITIH1P19827 911 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 CCNA2P20248 432 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 S100A5P33763 92 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 TTKP33981 857 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 RFC1P35251 1148 aaPredicted RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 PSMC2P35998 433 aaKnown RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 RECQLP46063 649 aaPredicted RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 KRT6CP48668 564 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 PDX1P52945 283 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 TMBIM6P55061 237 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 DAOAP59103 153 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 GNG2P59768 71 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 RPS21P63220 83 aaKnown RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 CLCQ05315 142 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 EIF2B5Q13144 721 aaKnown RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 AQP6Q13520 282 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 NFIL3Q16649 462 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 PIP5KL1Q5T9C9 394 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 FAXCQ5TGI0 409 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 SEL1L3Q68CR1 1132 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 PDPK2PQ6A1A2 396 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 GTF2IRD2BQ6EKJ0 949 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 KRT80Q6KB66 452 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 UGT3A1Q6NUS8 523 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 MSANTD2Q6P1R3 559 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 PLEKHG7Q6ZR37 379 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 C1orf229Q6ZS94 237 aaPredicted RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 ERN2Q76MJ5 926 aaKnown RBP4.38□□□□□ -1.71
MATR3-202ENST00000502422 BHLHA9Q7RTU4 235 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 GSTA5Q7RTV2 222 aa4.38□□□□□ -1.71
MATR3-202ENST00000502422 B3GNT8Q7Z7M8 397 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms