RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 EDAQ92838 391 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CAVIN3Q969G5 261 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 RSPRY1Q96DX4 576 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PHF21BQ96EK2 531 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 LINGO1Q96FE5 620 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CDKN2AIPNLQ96HQ2 116 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TPD52L3Q96J77 140 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC41A2Q96JW4 573 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 COQ10AQ96MF6 247 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 AGAP3Q96P47 875 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 MS4A10Q96PG2 267 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF607Q96SK3 696 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 FEVQ99581 238 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CPNE1Q99829 537 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 RHOXF2Q9BQY4 288 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PIGQQ9BRB3 760 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SIKE1Q9BRV8 207 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ABHD14AQ9BUJ0 271 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ALG8Q9BVK2 526 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 FRMD8Q9BZ67 464 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TRIM2Q9C040 744 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TBC1D17Q9HA65 648 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 PARD6AQ9NPB6 346 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZCCHC3Q9NUD5 404 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLCO1C1Q9NYB5 712 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 RAPGEFL1Q9UHV5 662 aa4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 CNOT11Q9UKZ1 510 aaKnown RBP4.17□□□□□ -1.74
HMGB1P21-201ENST00000502313 TIAM2Q8IVF5 1701 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 A0A0U1RQJ8 604 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 FEZF1A0PJY2 475 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ANKRD61A6NGH8 418 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 UNC119BA6NIH7 251 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 HSPB2A8KAH6 182 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 AHRRA9YTQ3 701 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 CLDN4O14493 209 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRYO14603 147 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ANKRD28O15084 1053 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 CASC3O15234 703 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MAGEB2O15479 319 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 AP5Z1O43299 807 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPOPO43791 374 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 PEX1O43933 1283 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMPRSS11DO60235 418 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRAMEF11O60813 436 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MTRF1O75570 445 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 RHBDL1O75783 438 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 CIB2O75838 187 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ICAM1P05362 532 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ELANEP08246 267 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 UQCRFS1P1P0C7P4 283 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZCCHC18P0CG32 403 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 CALCBP10092 127 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 DLATP10515 647 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 EEF1B2P24534 225 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 PTBP1P26599 531 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ITPKBP27987 946 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 RYKP34925 604 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 RDXP35241 583 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 GNL1P36915 607 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRCPP42785 496 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 AIF1P55008 147 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 HUNKP57058 714 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 CARD18P57730 90 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MRPS34P82930 218 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC25A3Q00325 362 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 E2F1Q01094 437 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 EGR4Q05215 589 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC18A2Q05940 514 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 NAE1Q13564 534 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TP53BP2Q13625 1128 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 NEDD9Q14511 834 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 HSPB2Q16082 182 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 C2orf68Q2NKX9 166 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 BEAN1Q3B7T3 259 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC36A3Q495N2 470 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 C6orf141Q5SZD1 244 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TREML2Q5T2D2 321 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ARHGEF16Q5VV41 709 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMEM268Q5VZI3 342 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 NCR3LG1Q68D85 454 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 CES5AQ6NT32 575 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 DLEU7Q6UYE1 221 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 LRRC55Q6ZSA7 311 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 DTX2Q86UW9 622 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 GPR180Q86V85 440 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 NRROSQ86YC3 692 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC35F3Q8IY50 421 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 AMER3Q8N944 861 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 KIAA0895Q8NCT3 520 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC25A43Q8WUT9 341 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 DVL3Q92997 716 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPDL1Q96EA4 605 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZC3HAV1LQ96H79 300 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 PGBD1Q96JS3 809 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPATA33Q96N06 139 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM210AQ96ND0 272 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MXRA8Q9BRK3 442 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM213AQ9BRX8 229 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 BDH2Q9BUT1 245 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms