RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 DPH7Q9BTV6 452 aa11.47□□□□□ -0.57
CNOT4-211ENST00000498534 ACAT2Q9BWD1 397 aa11.47□□□□□ -0.57
CNOT4-211ENST00000498534 SPATA7Q9P0W8 599 aa11.47□□□□□ -0.57
CNOT4-211ENST00000498534 TRPC4Q9UBN4 977 aa11.47□□□□□ -0.57
CNOT4-211ENST00000498534 DRG1Q9Y295 367 aaKnown RBP11.47□□□□□ -0.57
CNOT4-211ENST00000498534 TRAV17A0A0B4J275 112 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 OR2A25A4D2G3 310 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 H0YGG7 62 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 E2F3O00716 465 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 TXNDC9O14530 226 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 PCDH17O14917 1159 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 VAPBO95292 243 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 SERPINA7P05543 415 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 HEXBP07686 556 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 STSP08842 583 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 ICAM2P13598 275 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 PKMP14618 531 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 CHRM3P20309 590 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 NMBRP28336 390 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 RPA3P35244 121 aaPredicted RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 RPL22P35268 128 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 HSD17B2P37059 387 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 ARF3P61204 181 aaPredicted RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 AP2B1P63010 937 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 CRADDP78560 199 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 RNF187Q5TA31 235 aaPredicted RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 C1QL3Q5VWW1 255 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 GSTA5Q7RTV2 222 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 PRUNE1Q86TP1 453 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 LAPTM4BQ86VI4 370 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 SRRM1Q8IYB3 904 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 DTWD1Q8N5C7 304 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 OR9A1PQ8NGU1 263 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 SMPDL3AQ92484 453 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 HAS2Q92819 552 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 C8orf44Q96CB5 159 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 MVB12AQ96EY5 273 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 SLX1AQ9BQ83 275 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 DESI2Q9BSY9 194 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 TSGA10Q9BZW7 698 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 EIF2B3Q9NR50 452 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 FAM114A2Q9NRY5 505 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 TREX1Q9NSU2 369 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 PTGFRNQ9P2B2 879 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 STOX2Q9P2F5 926 aaPredicted RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 ENTPD4Q9Y227 616 aa11.46□□□□□ -0.57
CNOT4-211ENST00000498534 RUVBL2Q9Y230 463 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 MRPS2Q9Y399 296 aaKnown RBP11.46□□□□□ -0.57
CNOT4-211ENST00000498534 IGLV3-12A0A075B6K2 115 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 A0A1W2PPV9 198 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ZNF839A8K0R7 811 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 IDSB3KWA1 339 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ZG16O60844 167 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 CCNDBP1O95273 360 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 BMP10O95393 424 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 MED26O95402 600 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 MATN4O95460 622 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ESR1P03372 595 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ANXA5P08758 320 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ZSCAN5DPP0CG00 497 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 PRR35P0CG20 571 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ATP5DP30049 168 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 TNFSF10P50591 281 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 BASP1P80723 227 aaKnown RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 FASTKQ14296 549 aaKnown RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ARHGAP19Q14CB8 494 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 CCNG2Q16589 344 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 PRTGQ2VWP7 1150 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 GARNL3Q5VVW2 1013 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 RIPOR1Q6ZS17 1223 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 FJX1Q86VR8 437 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 CSNK1A1LQ8N752 337 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 SUN3Q8TAQ9 357 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 RERGQ96A58 199 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 MMABQ96EY8 250 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 PLCD4Q9BRC7 762 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 MKKSQ9NPJ1 570 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 C14orf105Q9NVL8 296 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 PLA2G3Q9NZ20 509 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 COPG2Q9UBF2 871 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 TSR3Q9UJK0 312 aaKnown RBP11.45□□□□□ -0.58
CNOT4-211ENST00000498534 CAPN6Q9Y6Q1 641 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 ABCA12Q86UK0 2595 aa11.45□□□□□ -0.58
CNOT4-211ENST00000498534 A0A0U1RQJ8 604 aa11.44□□□□□ -0.58
CNOT4-211ENST00000498534 ARHGAP10A1A4S6 786 aa11.44□□□□□ -0.58
CNOT4-211ENST00000498534 KRT87PA6NCN2 255 aa11.44□□□□□ -0.58
CNOT4-211ENST00000498534 E5RI56 91 aa11.44□□□□□ -0.58
CNOT4-211ENST00000498534 CRYABP02511 175 aaKnown RBP11.44□□□□□ -0.58
CNOT4-211ENST00000498534 CATP04040 527 aaKnown RBP11.44□□□□□ -0.58
CNOT4-211ENST00000498534 COX6A1P12074 109 aa11.44□□□□□ -0.58
CNOT4-211ENST00000498534 TNFRSF8P28908 595 aa11.44□□□□□ -0.58
CNOT4-211ENST00000498534 ADARP55265 1226 aaKnown RBP11.44□□□□□ -0.58
CNOT4-211ENST00000498534 YBX1P67809 324 aaKnown RBP11.44□□□□□ -0.58
CNOT4-211ENST00000498534 SARNPP82979 210 aaKnown RBP11.44□□□□□ -0.58
CNOT4-211ENST00000498534 CDK16Q00536 496 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms