RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 PIPSLA2A3N6 862 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 ISM1B1AKI9 464 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 H7BY64 318 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 PIP5K1BO14986 540 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 KDM1AO60341 852 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 C1GALT1C1LP0DN25 315 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 TROVE2P10155 538 aaKnown RBP eCLIP23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 UGT2B7P16662 529 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 NEK2P51955 445 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 TUBB3Q13509 450 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 TBCCQ15814 346 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 ATG9BQ674R7 924 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 ZCCHC8Q6NZY4 707 aaKnown RBP23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 ABHD11Q8NFV4 315 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 PRAP1Q96NZ9 151 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 SYNPO2LQ9H987 977 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 HRASLS2Q9NWW9 162 aa23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 ZNF490Q9ULM2 529 aaPredicted RBP23.35■■□□□ 1.33
TNFRSF4-203ENST00000497869 OR5K3A6NET4 321 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 LILRA5A6NI73 299 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 CLGNO14967 610 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 ENO1P06733 434 aaKnown RBP23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 JUPP14923 745 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 ABRAXAS2Q15018 415 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 ZRSR2Q15696 482 aaKnown RBP23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 LIPJQ5W064 366 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 C17orf64Q86WR6 236 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 OR52B2Q96RD2 323 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 SLC38A3Q99624 504 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 PCBD2Q9H0N5 130 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 STK38LQ9Y2H1 464 aa23.34■■□□□ 1.33
TNFRSF4-203ENST00000497869 FAM221BA6H8Z2 402 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 SDHDO14521 159 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 CDX4O14627 284 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 NUDT21O43809 227 aaKnown RBP23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 ZNF806P0C7X5 589 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 HOXB3P14651 431 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 SLBPQ14493 270 aaKnown RBP eCLIP23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 KIR2DS3Q14952 304 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 SF1Q15637 639 aaKnown RBP23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 GRHL2Q6ISB3 625 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 OR4K1Q8NGD4 311 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 OR2T11Q8NH01 316 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 SEC16BQ96JE7 1060 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 GIMAP2Q9UG22 337 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 PADI4Q9UM07 663 aa23.33■■□□□ 1.33
TNFRSF4-203ENST00000497869 GOLGA8QA0A0J9YX86 632 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 GSAPA4D1B5 854 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 GOLGA8OA6NCC3 632 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 GOLGA8NF8WBI6 632 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 MANBAO00462 879 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 GIPC1O14908 333 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 B4GAT1O43505 415 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 UGDHO60701 494 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 UBXN7O94888 489 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 LINC00032P0C843 101 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 EPHA3P29320 983 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 INHBCP55103 352 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 OR1D5P58170 312 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 CSNK1G2P78368 415 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 SPEM2Q0P670 501 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 NKAIN2Q5VXU1 208 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 AVL9Q8NBF6 648 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 WDR20Q8TBZ3 569 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 ATOH1Q92858 354 aaPredicted RBP23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 USP7Q93009 1102 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 MTFMTQ96DP5 389 aaKnown RBP23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 PTCD3Q96EY7 689 aaKnown RBP23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 DUSP23Q9BVJ7 150 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 EHD1Q9H4M9 534 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 PARD6AQ9NPB6 346 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 KCNK4Q9NYG8 393 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 VTI1BQ9UEU0 232 aa23.33■■□□□ 1.32
TNFRSF4-203ENST00000497869 ATP6AP2A0A1C7CYW4 349 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 RHPN2P1A8MT19 583 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 PRAMEF10O60809 474 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 CRCPO75575 148 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 ATP6AP2O75787 350 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 GLB1P16278 677 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 CFHR1Q03591 330 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 SGO1Q5FBB7 561 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 GUSBP11Q6P575 273 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 DBX2Q6ZNG2 339 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 PLD3Q8IV08 490 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 FAM181AQ8N9Y4 354 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 MAELQ96JY0 434 aaKnown RBP23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 PRRX2Q99811 253 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 STN1Q9H668 368 aaKnown RBP23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 MEAF6Q9HAF1 191 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 DNAAF2Q9NVR5 837 aaKnown RBP23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 CCL27Q9Y4X3 112 aa23.32■■□□□ 1.32
TNFRSF4-203ENST00000497869 MUC6Q6W4X9 2439 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 SLCO1B7G3V0H7 640 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 DIAPH2O60879 1101 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 HK2P52789 917 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 ARFIP2P53365 341 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 GABPB1Q06547 395 aaPredicted RBP23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 NR1D2Q14995 579 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 XKR7Q5GH72 579 aa23.31■■□□□ 1.32
TNFRSF4-203ENST00000497869 GKAP1Q5VSY0 366 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms