RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PLCZ1Q86YW0 608 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 OR6C4Q8NGE1 309 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 SETD6Q8TBK2 473 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 COL21A1Q96P44 957 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 GPR20Q99678 358 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 MS4A12Q9NXJ0 267 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 TAS2R13Q9NYV9 303 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 PCDHGA6Q9Y5G7 932 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.38
GAPVD1-220ENST00000497580 FAM240BA0A1B0GVZ2 78 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC7A4O43246 635 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 AP2A2O94973 939 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 PTPRNQ16849 979 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 WSCD1Q658N2 575 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 CATSPERGQ6ZRH7 1159 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 DNAJC22Q8N4W6 341 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 C19orf18Q8NEA5 215 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 OR4F6Q8NGB9 312 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 KIAA1191Q96A73 305 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 NXF2Q9GZY0 626 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 ELOVL6Q9H5J4 265 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF556Q9HAH1 456 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 GALNT9Q9HCQ5 603 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 GOLGA4Q13439 2230 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 E9PAM4 449 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 NIPSNAP2O75323 286 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 TNFRSF1BP20333 461 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 RPS5P46782 204 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 DAOAP59103 153 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 ZNF284Q2VY69 593 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 TRIQKQ629K1 86 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 SPPL2AQ8TCT8 520 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 NTAN1Q96AB6 310 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 MFSD1Q9H3U5 465 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 DIABLOQ9NR28 239 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 CATSPERZQ9NTU4 200 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 HSPE1-MOB4S4R3N1 261 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 SHOXO15266 292 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 PLOD3O60568 738 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 TSPAN1O60635 241 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 ICAM2P13598 275 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 NAGAP17050 411 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 IGFBP6P24592 240 aaPredicted RBP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC10A7Q0GE19 358 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 GPR19Q15760 415 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 FAM122CQ6P4D5 195 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 ARHGAP12Q8IWW6 846 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 OR4M2Q8NGB6 313 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 HSH2DQ96JZ2 352 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 V9GYH0 126 aa12.7□□□□□ -0.38
GAPVD1-220ENST00000497580 FADS2P1A8MWK0 482 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 ARNTLO00327 626 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 RECQL4O94761 1208 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CLEC2LP0C7M8 214 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CASP9P55211 416 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 DSC3Q14574 896 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC14A2Q15849 920 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 WSCD2Q2TBF2 565 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 TIMM50Q3ZCQ8 353 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 OVOS1Q6IE37 1185 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 OTOP2Q7RTS6 562 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 NT5C3BQ969T7 300 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 MAGEB10Q96LZ2 347 aaPredicted RBP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SPATA9Q9BWV2 254 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 APOL5Q9BWW9 433 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 NEUROG3Q9Y4Z2 214 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 IGKV6-21A0A0C4DH24 114 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 J3KR12 359 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 FZD9O00144 591 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 CDRT1O95170 752 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 GPC1P35052 558 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 GDF5P43026 501 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 KCNQ1P51787 676 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 TRIM71Q2Q1W2 868 aaKnown RBP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SIRPB2Q5JXA9 342 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 EIF3MQ7L2H7 374 aaKnown RBP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 C7orf57Q8NEG2 295 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 FERD3LQ96RJ6 166 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 BARHL1Q9BZE3 327 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SPATC1LQ9H0A9 340 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SLC6A14Q9UN76 642 aa12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 SAMD4AQ9UPU9 718 aaKnown RBP12.69□□□□□ -0.38
GAPVD1-220ENST00000497580 KCNE2Q9Y6J6 123 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms