RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	UBFD1	O14562	309 aa	Known RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CLGN	O14967	610 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CAPN5	O15484	640 aa	Predicted RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SNN	O75324	88 aa	Predicted RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	WFS1	O76024	890 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CCNDBP1	O95273	360 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MLYCD	O95822	493 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	C9	P02748	559 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	RPLP0	P05388	317 aa	Known RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CHRNG	P07510	517 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	KIT	P10721	976 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CMPK1	P30085	196 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ARL1	P40616	181 aa	Predicted RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	LSS	P48449	732 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ABCE1	P61221	599 aa	Known RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ARL13A	Q5H913	290 aa	Predicted RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CATSPERE	Q5SY80	951 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	IRGC	Q6NXR0	463 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	WDR74	Q6RFH5	385 aa	Predicted RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SLCO4C1	Q6ZQN7	724 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	USP53	Q70EK8	1073 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GLRX5	Q86SX6	157 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TRIM73	Q86UV7	250 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ABHD11	Q8NFV4	315 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NETO1	Q8TDF5	533 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	AGAP11	Q8TF27	550 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	WDR34	Q96EX3	536 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	THOC1	Q96FV9	657 aa	Known RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PPM1M	Q96MI6	270 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZNF382	Q96SR6	550 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NSRP1	Q9H0G5	558 aa	Known RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EPN3	Q9H201	632 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SLC6A20	Q9NP91	592 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MRPS30	Q9NP92	439 aa	Known RBP	13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FGFR1OP2	Q9NVK5	253 aa		13.44	□□□□□ -0.26
ATPAF2-208	ENST00000496852		A0A0J9YY10	115 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NTN3	O00634	580 aa	Predicted RBP	13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TM4SF5	O14894	197 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SHOX2	O60902	331 aa	Predicted RBP	13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CPNE6	O95741	557 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OTC	P00480	354 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CDH1	P12830	882 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	GRIA3	P42263	894 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CASP2	P42575	452 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PPM1F	P49593	454 aa	Predicted RBP	13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CCNG1	P51959	295 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SH3BP2	P78314	561 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CHIT1	Q13231	466 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	RBBP7	Q16576	425 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CLPP	Q16740	277 aa	Predicted RBP	13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TMPRSS9	Q7Z410	1059 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TMPRSS11B	Q86T26	416 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CRLF3	Q8IUI8	442 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PLXDC1	Q8IUK5	500 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OR4F6	Q8NGB9	312 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	AGR3	Q8TD06	166 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ATP6V1E2	Q96A05	226 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZDHHC12	Q96GR4	267 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CD180	Q99467	661 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SORT1	Q99523	831 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MAP3K3	Q99759	626 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NUDT22	Q9BRQ3	303 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EHD1	Q9H4M9	534 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PELI2	Q9HAT8	420 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	THAP1	Q9NVV9	213 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TMEM9	Q9P0T7	183 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	STK38L	Q9Y2H1	464 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	KLK4	Q9Y5K2	254 aa		13.43	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TLCD2	A6NGC4	264 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	UGDH	O60701	494 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	EBLN1	P0CF75	366 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	C1GALT1C1L	P0DN25	315 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	HOXB3	P14651	431 aa	Predicted RBP	13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CD22	P20273	847 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MAG	P20916	626 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	PKNOX1	P55347	436 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ERVPABLB-1	P60509	514 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OCRL	Q01968	901 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	IRF8	Q02556	426 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ILK	Q13418	452 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	DOC2A	Q14183	400 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TBCC	Q15814	346 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	XKR6	Q5GH73	641 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ATG9B	Q674R7	924 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZNF425	Q6IV72	752 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TMEM71	Q6P5X7	295 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	NXPE4	Q6UWF7	544 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FAM92B	Q6ZTR7	304 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	SYVN1	Q86TM6	617 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	FAM129C	Q86XR2	697 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	L3MBTL4	Q8NA19	623 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	DEFB124	Q8NES8	71 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	OR4K1	Q8NGD4	311 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TGM7	Q96PF1	710 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	CDK15	Q96Q40	435 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	DPH7	Q9BTV6	452 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	TNFRSF12A	Q9NP84	129 aa		13.42	□□□□□ -0.26
ATPAF2-208	ENST00000496852	MID1IP1	Q9NPA3	183 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms