RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FAM20CQ8IXL6 584 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 CCNYL1Q8N7R7 359 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ZNF483Q8TF39 744 aaPredicted RBP20.93■□□□□ 0.94
C9orf3-222ENST00000496567 CCDC74BQ96LY2 380 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 DEPDC7Q96QD5 511 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 DPH7Q9BTV6 452 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 TMEM184CQ9NVA4 438 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 IGHV5-51A0A0C4DH38 117 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 SLC9B1P1A6NJY1 282 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 A8MU76 341 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 MT-CO3P00414 261 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 NEFHP12036 1026 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 CDH1P12830 882 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ST6GAL1P15907 406 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 MAGP20916 626 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 CCKBRP32239 447 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ARL4DP49703 201 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 WDR4P57081 412 aaKnown RBP20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ARHGAP22Q7Z5H3 698 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ARFGAP2Q8N6H7 521 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ABHD11Q8NFV4 315 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 KLHL6Q8WZ60 621 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 ZNF768Q9H5H4 540 aaKnown RBP20.93■□□□□ 0.94
C9orf3-222ENST00000496567 IPPKQ9H8X2 491 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 PELI2Q9HAT8 420 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 SLC6A20Q9NP91 592 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 SH2B3Q9UQQ2 575 aa20.93■□□□□ 0.94
C9orf3-222ENST00000496567 WDR91A4D1P6 747 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 H2AFYO75367 372 aaKnown RBP20.92■□□□□ 0.94
C9orf3-222ENST00000496567 PVRP15151 417 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 CCR8P51685 355 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 YBX1P67809 324 aaKnown RBP20.92■□□□□ 0.94
C9orf3-222ENST00000496567 HSD11B2P80365 405 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 CLCQ05315 142 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 PCDH1Q08174 1060 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 PUM1Q14671 1186 aaKnown RBP eCLIP20.92■□□□□ 0.94
C9orf3-222ENST00000496567 HES3Q5TGS1 186 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 ADCK2Q7Z695 626 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 TMPRSS11BQ86T26 416 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 C19orf47Q8N9M1 422 aaKnown RBP20.92■□□□□ 0.94
C9orf3-222ENST00000496567 PPP1R14CQ8TAE6 165 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 MDM1Q8TC05 714 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 ATP6V1E2Q96A05 226 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 TCTN2Q96GX1 697 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 PLCD4Q9BRC7 762 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 GATA5Q9BWX5 397 aaPredicted RBP20.92■□□□□ 0.94
C9orf3-222ENST00000496567 EHD1Q9H4M9 534 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 CUEDC1Q9NWM3 386 aaPredicted RBP20.92■□□□□ 0.94
C9orf3-222ENST00000496567 CLCA2Q9UQC9 943 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 STK38LQ9Y2H1 464 aa20.92■□□□□ 0.94
C9orf3-222ENST00000496567 IGKV1-8A0A0C4DH67 115 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 E7EQ34 232 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 H7BY64 318 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 MLYCDO95822 493 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 EPORP19235 508 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 SEPHS1P49903 392 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 IRF8Q02556 426 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 ATG9BQ674R7 924 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 ZNF425Q6IV72 752 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 NXPE4Q6UWF7 544 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 B3GNT8Q7Z7M8 397 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 CACTIN-AS1Q8N1I8 211 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 ADAMTS14Q8WXS8 1223 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 GRAMD1AQ96CP6 724 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 SLC41A2Q96JW4 573 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 PRAP1Q96NZ9 151 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 NSUN5Q96P11 429 aaKnown RBP20.91■□□□□ 0.94
C9orf3-222ENST00000496567 STRADBQ9C0K7 418 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 CHRNA10Q9GZZ6 450 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 KLHL25Q9H0H3 589 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 NOL11Q9H8H0 719 aaKnown RBP20.91■□□□□ 0.94
C9orf3-222ENST00000496567 PDE7BQ9NP56 450 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 SEMA4BQ9NPR2 832 aaPredicted RBP20.91■□□□□ 0.94
C9orf3-222ENST00000496567 SOHLH2Q9NX45 425 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 BTRCQ9Y297 605 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 KLHL20Q9Y2M5 609 aa20.91■□□□□ 0.94
C9orf3-222ENST00000496567 OR2A25A4D2G3 310 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 HGSO14964 777 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-222ENST00000496567 OTCP00480 354 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 C1GALT1C1LP0DN25 315 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 FGF3P11487 239 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-222ENST00000496567 CHN1P15882 459 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 NELFEP18615 380 aaKnown RBP20.9■□□□□ 0.94
C9orf3-222ENST00000496567 GRK3P35626 688 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 CCNG1P51959 295 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 PDX1P52945 283 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 CDH13P55290 713 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 TBCCQ15814 346 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 RBBP7Q16576 425 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 ISXQ2M1V0 245 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 XKR6Q5GH73 641 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 CATSPEREQ5SY80 951 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 TMTC4Q5T4D3 741 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 FCRL6Q6DN72 434 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 SLCO4C1Q6ZQN7 724 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 FRMD7Q6ZUT3 714 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 RPS27LQ71UM5 84 aaKnown RBP20.9■□□□□ 0.94
C9orf3-222ENST00000496567 TMPRSS12Q86WS5 348 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 RCBTB1Q8NDN9 531 aa20.9■□□□□ 0.94
C9orf3-222ENST00000496567 OR4K1Q8NGD4 311 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms