RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 KCNAB1Q14722 419 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 C16orf72Q14CZ0 275 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PDK4Q16654 411 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CACHD1Q5VU97 1274 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 LIPMQ5VYY2 423 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF425Q6IV72 752 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 GTF2H2CQ6P1K8 395 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 RBM44Q6ZP01 1051 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PRSS42Q7Z5A4 293 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SLC22A9Q8IVM8 553 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SNX31Q8N9S9 440 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 OR52B6Q8NGF0 335 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 OR6Y1Q8NGX8 325 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SLC22A18Q96BI1 424 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 FCRL4Q96PJ5 515 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CDK15Q96Q40 435 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 DPH7Q9BTV6 452 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 GATA5Q9BWX5 397 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CNOT10Q9H9A5 744 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 MRPS30Q9NP92 439 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SEMA4BQ9NPR2 832 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 C1GALT1Q9NS00 363 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF225Q9UK10 706 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 TMCO1Q9UM00 188 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 A0A1W2PNU3 283 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 FAM149AA5PLN7 773 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 H7BY64 318 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 UBFD1O14562 309 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 HAT1O14929 419 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 ZW10O43264 779 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CTSVO60911 334 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SUPT7LO94864 414 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 MT-CO3P00414 261 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CHN1P15882 459 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 NR1D1P20393 614 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CMPK1P30085 196 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 DNAJB13P59910 316 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 TMPRSS11BQ86T26 416 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PAQR7Q86WK9 346 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 C17orf64Q86WR6 236 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PLD3Q8IV08 490 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 C19orf47Q8N9M1 422 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SLC5A11Q8WWX8 675 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PRAP1Q96NZ9 151 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CD180Q99467 661 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PAIP2Q9BPZ3 127 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 TNFRSF12AQ9NP84 129 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 APOBEC2Q9Y235 224 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 TNPO3Q9Y5L0 923 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 FEZF1A0PJY2 475 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 OR2A25A4D2G3 310 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 TRIM13O60858 407 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 CSO75390 466 aaKnown RBP12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ANKRD34CP0C6C1 535 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 BGNP21810 368 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 GABRA4P48169 554 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ATP1A2P50993 1020 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 INHBCP55103 352 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 SH3BP2P78314 561 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 CSNK1G2P78368 415 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 CLCQ05315 142 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 TRAF3Q13114 568 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 CLPPQ16740 277 aaPredicted RBP12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ISXQ2M1V0 245 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ADNP2Q6IQ32 1131 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 FIGLAQ6QHK4 219 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 FAM129CQ86XR2 697 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 LSMEM2Q8N112 164 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 WDR48Q8TAF3 677 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 TRPC4APQ8TEL6 797 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ADAMTS14Q8WXS8 1223 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 KLHL6Q8WZ60 621 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 SLC41A2Q96JW4 573 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 HAUS8Q9BT25 410 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 NOL11Q9H8H0 719 aaKnown RBP12.96□□□□□ -0.34
PTPN7-218ENST00000496197 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.34
PTPN7-218ENST00000496197 IPPKQ9H8X2 491 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 MID2Q9UJV3 735 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 KLK4Q9Y5K2 254 aa12.96□□□□□ -0.34
PTPN7-218ENST00000496197 CNOT1A5YKK6 2376 aaKnown RBP12.96□□□□□ -0.34
PTPN7-218ENST00000496197 LCMT2O60294 686 aaKnown RBP12.95□□□□□ -0.34
PTPN7-218ENST00000496197 CHRNGP07510 517 aa12.95□□□□□ -0.34
PTPN7-218ENST00000496197 EBLN1P0CF75 366 aa12.95□□□□□ -0.34
PTPN7-218ENST00000496197 EPB42P16452 691 aa12.95□□□□□ -0.34
PTPN7-218ENST00000496197 NELFEP18615 380 aaKnown RBP12.95□□□□□ -0.34
PTPN7-218ENST00000496197 CCKBRP32239 447 aa12.95□□□□□ -0.34
PTPN7-218ENST00000496197 ABATP80404 500 aa12.95□□□□□ -0.34
PTPN7-218ENST00000496197 CHIT1Q13231 466 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms