RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 AGTRAPQ6RW13 159 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 RAPH1Q70E73 1250 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 ADAMTSL2Q86TH1 951 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 UHMK1Q8TAS1 419 aaKnown RBP15.71■□□□□ 0.11
SF3A1-209ENST00000496189 UBLCP1Q8WVY7 318 aaPredicted RBP15.71■□□□□ 0.11
SF3A1-209ENST00000496189 SLC44A1Q8WWI5 657 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 RERGQ96A58 199 aaPredicted RBP15.71■□□□□ 0.11
SF3A1-209ENST00000496189 ALKBH8Q96BT7 664 aaKnown RBP15.71■□□□□ 0.11
SF3A1-209ENST00000496189 WBP1Q96G27 269 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 PAFAH2Q99487 392 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 SPRTNQ9H040 489 aaPredicted RBP15.71■□□□□ 0.11
SF3A1-209ENST00000496189 PCMTD2Q9NV79 361 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 CTNNAL1Q9UBT7 734 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 NDOR1Q9UHB4 597 aa15.71■□□□□ 0.11
SF3A1-209ENST00000496189 NOVA2Q9UNW9 492 aaKnown RBP15.71■□□□□ 0.11
SF3A1-209ENST00000496189 A0A0J9YVX5 310 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 ATXN7O15265 892 aaPredicted RBP15.7■□□□□ 0.1
SF3A1-209ENST00000496189 CREG1O75629 220 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 TSPAN12O95859 305 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 RAB40ALP0C0E4 278 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 EZRP15311 586 aaKnown RBP15.7■□□□□ 0.1
SF3A1-209ENST00000496189 ALAS2P22557 587 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 PTPN4P29074 926 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 GRK3P35626 688 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 GABRA4P48169 554 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 DCDP81605 110 aaKnown RBP15.7■□□□□ 0.1
SF3A1-209ENST00000496189 SLC29A2Q14542 456 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 MROH9Q5TGP6 573 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 PRAMEF17Q5VTA0 474 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 EMBQ6PCB8 327 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 FAM199XQ6PEV8 388 aaPredicted RBP15.7■□□□□ 0.1
SF3A1-209ENST00000496189 BORAQ6PGQ7 559 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 C17orf64Q86WR6 236 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 CEP97Q8IW35 865 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 TBC1D19Q8N5T2 526 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 EGFL8Q99944 293 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 PLCD4Q9BRC7 762 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 HAUS8Q9BT25 410 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 DHRS4Q9BTZ2 278 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 NLNQ9BYT8 704 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 CHST8Q9H2A9 424 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 ACTL8Q9H568 366 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 CAB39LQ9H9S4 337 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 FETUBQ9UGM5 382 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 IL17BQ9UHF5 180 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 ZNF180Q9UJW8 692 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 TLK1Q9UKI8 766 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 FARSAQ9Y285 508 aaKnown RBP15.7■□□□□ 0.1
SF3A1-209ENST00000496189 FAM208BQ5VWN6 2430 aa15.7■□□□□ 0.1
SF3A1-209ENST00000496189 OR2A25A4D2G3 310 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 TK2O00142 265 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 TXNDC9O14530 226 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 GUCA1CO95843 209 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 RECKO95980 971 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 EIF2S1P05198 315 aaKnown RBP15.69■□□□□ 0.1
SF3A1-209ENST00000496189 ANXA5P08758 320 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 RORAP35398 523 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 SERPINB8P50452 374 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 VSX2P58304 361 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-209ENST00000496189 CYP4F2P78329 520 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 NAE1Q13564 534 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 ERV3-1Q14264 604 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 ZNF460Q14592 562 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 ZKSCAN8Q15776 578 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-209ENST00000496189 PHKG1Q16816 387 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 PTCHD3Q3KNS1 767 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 TTLL10Q6ZVT0 673 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 RNF44Q7L0R7 432 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 TBC1D1Q86TI0 1168 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-209ENST00000496189 SYVN1Q86TM6 617 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 SLC38A9Q8NBW4 561 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 DERL2Q9GZP9 239 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 ATG10Q9H0Y0 220 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 PPCSQ9HAB8 311 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 IFT80Q9P2H3 777 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-209ENST00000496189 POLHQ9Y253 713 aa15.69■□□□□ 0.1
SF3A1-209ENST00000496189 MRPS18BQ9Y676 258 aaKnown RBP15.69■□□□□ 0.1
SF3A1-209ENST00000496189 CFAP47Q6ZTR5 3102 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 A0A087X1B8 175 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 A0A1B0GX78 115 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 NPEPPSL1A6NEC2 478 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 NKX2-8O15522 239 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 PHGDHO43175 533 aaKnown RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 S100BP04271 92 aaPredicted RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 CCDC166P0CW27 439 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 SFTPCP11686 197 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 WT1P19544 449 aaPredicted RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 TYK2P29597 1187 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 SLC26A3P40879 764 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 CCR10P46092 362 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 HNMTP50135 292 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 ATP6V0D1P61421 351 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 WASHC2DQ5SRD0 308 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 UBAP2Q5T6F2 1119 aaKnown RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 C1orf189Q5VU69 101 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 LCTLQ6UWM7 567 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 TMEM207Q6UWW9 146 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 ENDOVQ8N8Q3 282 aaKnown RBP15.68■□□□□ 0.1
SF3A1-209ENST00000496189 FBXL8Q96CD0 374 aa15.68■□□□□ 0.1
SF3A1-209ENST00000496189 PARD6BQ9BYG5 372 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms