RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 NUDT17P0C025 328 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 MSL3P1P0C860 447 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 CDH1P12830 882 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 CCND1P24385 295 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 EIF2S3P41091 472 aaKnown RBP18.64■□□□□ 0.57
HDAC4-212ENST00000495497 SLC6A12P48065 614 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 HSPA7P48741 367 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 HNMTP50135 292 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 FRMPD2BQ6IN97 320 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 ZNF425Q6IV72 752 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 KLC3Q6P597 504 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 CYB5D1Q6P9G0 228 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 C17orf64Q86WR6 236 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 TDRPQ86YL5 185 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 TMEM126BQ8IUX1 230 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 MREGQ8N565 214 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 ZNF248Q8NDW4 579 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 SCYL1Q96KG9 808 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 TSNARE1Q96NA8 513 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 PCBD2Q9H0N5 130 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 STARD5Q9NSY2 213 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 SERTAD3Q9UJW9 196 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 PILRAQ9UKJ1 303 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 ACSL6Q9UKU0 697 aa18.64■□□□□ 0.57
HDAC4-212ENST00000495497 SNRNP200O75643 2136 aaKnown RBP18.64■□□□□ 0.57
HDAC4-212ENST00000495497 ANKRD12Q6UB98 2062 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 LOC105369274A0A096LPK9 316 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 LOC102723532A0A0G2JNH3 316 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 H3BMH7 237 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 STMND1H3BQB6 276 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 WDR47O94967 919 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 DLGAP3O95886 979 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 S100BP04271 92 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-212ENST00000495497 TUBBP07437 444 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 PYGBP11216 843 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 MTHFD2P13995 350 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 ITGA1P56199 1179 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 IFFO1Q0D2I5 559 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 TECRLQ5HYJ1 363 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 ZC3H12BQ5HYM0 836 aaKnown RBP18.63■□□□□ 0.57
HDAC4-212ENST00000495497 SULT1C3Q6IMI6 304 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 BPHLQ86WA6 291 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-212ENST00000495497 DTX1Q86Y01 620 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 OR4N4Q8N0Y3 316 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 SLC38A9Q8NBW4 561 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 GALNT6Q8NCL4 622 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 PDPRQ8NCN5 879 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 OR8K5Q8NH50 307 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 RHEBL1Q8TAI7 183 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 KCNE4Q8WWG9 221 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 ZBTB9Q96C00 473 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 IRAK4Q9NWZ3 460 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 NUDT4Q9NZJ9 180 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 ANKMY1Q9P2S6 941 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 PTBP2Q9UKA9 531 aaKnown RBP18.63■□□□□ 0.57
HDAC4-212ENST00000495497 SNX7Q9UNH6 387 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 PLAAQ9Y263 795 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 TMEM184BQ9Y519 407 aaPredicted RBP18.63■□□□□ 0.57
HDAC4-212ENST00000495497 ASB1Q9Y576 335 aa18.63■□□□□ 0.57
HDAC4-212ENST00000495497 E7EQ34 232 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 MAP2K7O14733 419 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 RAD1O60671 282 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 OR2B3O76000 313 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 MT-ND3P03897 115 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 LIPCP11150 499 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 COL6A2P12110 1019 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CD82P27701 267 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 AGTR2P50052 363 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 VSX2P58304 361 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CSNK1G2P78368 415 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 MEF2AQ02078 507 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-212ENST00000495497 SRSF6Q13247 344 aaKnown RBP18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CLN3Q13286 438 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 ST3GAL2Q16842 350 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CDKL4Q5MAI5 379 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CATSPEREQ5SY80 951 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 RNF44Q7L0R7 432 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CABS1Q96KC9 395 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 SELENOSQ9BQE4 189 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 HAUS8Q9BT25 410 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 PPCSQ9HAB8 311 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 TMEM184CQ9NVA4 438 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 DYRK1BQ9Y463 629 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 CELSR3Q9NYQ7 3312 aa18.62■□□□□ 0.57
HDAC4-212ENST00000495497 IGF2RP11717 2491 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 FEZF1A0PJY2 475 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-212ENST00000495497 KLK10O43240 276 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 ZNF749O43361 778 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 EIF2S1P05198 315 aaKnown RBP18.61■□□□□ 0.57
HDAC4-212ENST00000495497 KRT15P19012 456 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 ITPKBP27987 946 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 GGT5P36269 586 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 NAA25Q14CX7 972 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 TSNAXIP1Q2TAA8 658 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 C16orf46Q6P387 395 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 C6orf15Q6UXA7 325 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-212ENST00000495497 KLHDC8AQ8IYD2 350 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 GPR135Q8IZ08 494 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 TCAIMQ8N3R3 496 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms