RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 KRT6BP04259 564 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 FGF4P08620 206 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 VIMP08670 466 aaKnown RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 C1GALT1C1LP0DN25 315 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 UROSP10746 265 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 HGFP14210 728 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 TYRP1P17643 537 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 CDH3P22223 829 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 PRDX3P30048 256 aaKnown RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 HMOX2P30519 316 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 LSP1P33241 339 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 KRT6CP48668 564 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 RPL14P50914 215 aaKnown RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 E2F1Q01094 437 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 TRAF3Q13114 568 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 CHIT1Q13231 466 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 ZXDCQ2QGD7 858 aaPredicted RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 FBXO48Q5FWF7 155 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 IRGCQ6NXR0 463 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 NXPE4Q6UWF7 544 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 SLCO4C1Q6ZQN7 724 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 ZNF761Q86XN6 746 aaPredicted RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 MYLK4Q86YV6 388 aaPredicted RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 CLYBLQ8N0X4 340 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 BAHD1Q8TBE0 780 aaPredicted RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 NETO1Q8TDF5 533 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 RSC1A1Q92681 617 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 NSUN5Q96P11 429 aaKnown RBP13.05□□□□□ -0.32
APTX-231ENST00000494973 OR2A14Q96R47 310 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 OR4K3Q96R72 315 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 CHRNA10Q9GZZ6 450 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 SEMA6CQ9H3T2 930 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 NT5DC2Q9H857 520 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 ZBTB26Q9HCK0 441 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 BTBD3Q9Y2F9 522 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 TSC22D4Q9Y3Q8 395 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 ASB1Q9Y576 335 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 PCDHGA1Q9Y5H4 931 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 U3KQA8 63 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 PCM1Q15154 2024 aa13.05□□□□□ -0.32
APTX-231ENST00000494973 LRRC14BA6NHZ5 514 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 E7EQ34 232 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 OR7A17O14581 309 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 AZIN1O14977 448 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 CAPN5O15484 640 aaPredicted RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 EDF1O60869 148 aaKnown RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 TGDSO95455 350 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 RPLP0P05388 317 aaKnown RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
APTX-231ENST00000494973 JUPP14923 745 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 PEBP1P30086 187 aaKnown RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 OR1D5P58170 312 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 IFT88Q13099 833 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 SH2D4BQ5SQS7 431 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 TMEM71Q6P5X7 295 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 CYB5D1Q6P9G0 228 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 RNF165Q6ZSG1 346 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 PRSS42Q7Z5A4 293 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 ADCK2Q7Z695 626 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 C2orf73Q8N5S3 287 aaPredicted RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 OR4F6Q8NGB9 312 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 JPH3Q8WXH2 748 aaPredicted RBP13.04□□□□□ -0.32
APTX-231ENST00000494973 CCT6BQ92526 530 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 NCSTNQ92542 709 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 ACAT2Q9BWD1 397 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 LRRN3Q9H3W5 708 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 ELOVL6Q9H5J4 265 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 SPHK1Q9NYA1 384 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 ADAM21Q9UKJ8 722 aa13.04□□□□□ -0.32
APTX-231ENST00000494973 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TRPC5OSA6NMA1 111 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 H0YIV9 168 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TMX2-CTNND1H3BSU7 103 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 SH3BP5O60239 455 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 WFS1O76024 890 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 C9P02748 559 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 CHRNGP07510 517 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 ANKRD34CP0C6C1 535 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 CDH1P12830 882 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 HSD3B1P14060 373 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 SDHBP21912 280 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 HSD3B2P26439 372 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 RPS15AP62244 130 aaKnown RBP13.03□□□□□ -0.32
APTX-231ENST00000494973 SH3BP2P78314 561 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 REEP5Q00765 189 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
APTX-231ENST00000494973 SPIDRQ14159 915 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 DOC2AQ14183 400 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 AMZ1Q400G9 498 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 ZC3H12BQ5HYM0 836 aaKnown RBP13.03□□□□□ -0.32
APTX-231ENST00000494973 KANK2Q63ZY3 851 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 TTC19Q6DKK2 380 aaPredicted RBP13.03□□□□□ -0.32
APTX-231ENST00000494973 ZNF425Q6IV72 752 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 GLRX5Q86SX6 157 aa13.03□□□□□ -0.32
APTX-231ENST00000494973 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms