RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 NF1P21359 2839 aa11.34□□□□□ -0.59
CSNK1E-212ENST00000494610 SVILO95425 2214 aa11.33□□□□□ -0.59
CSNK1E-212ENST00000494610 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 FAM95CA0A1B0GW59 222 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 ARHGAP10A1A4S6 786 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 ANKUB1A6NFN9 424 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 OR51F1A6NGY5 319 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 TMEM150CB9EJG8 249 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 TRIM49D1C9J1S8 452 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 CCL22O00626 93 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 GAPDHSO14556 408 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 HCRTR1O43613 425 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 VPS26AO75436 327 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 FAM155BO75949 473 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 AP2A2O94973 939 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 S1PR4O95977 384 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 CD9P21926 228 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 CRABP2P29373 138 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 MPP1Q00013 466 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 GTF2H3Q13889 308 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC9A5Q14940 896 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 TNFAIP8L3Q5GJ75 292 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 GPRC6AQ5T6X5 926 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 TRABD2AQ86V40 505 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 SERPINA9Q86WD7 417 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 RBM12BQ8IXT5 1001 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 SYTL1Q8IYJ3 562 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 KRT222Q8N1A0 295 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 GPATCH11Q8N954 259 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 DDHD1Q8NEL9 900 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 TLCD1Q96CP7 247 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 C12orf66Q96MD2 445 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 C5orf34Q96MH7 638 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 FCRL4Q96PJ5 515 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 PANX3Q96QZ0 392 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 SMAD5Q99717 465 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 NLNQ9BYT8 704 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC29A3Q9BZD2 475 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 CNOT10Q9H9A5 744 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 MKS1Q9NXB0 559 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 ZDHHC3Q9NYG2 299 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 CTNNAL1Q9UBT7 734 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC5A6Q9Y289 635 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 PSAT1Q9Y617 370 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 HIVEP1P15822 2718 aa11.33□□□□□ -0.6
CSNK1E-212ENST00000494610 A0A087X1B8 175 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 E5RI56 91 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 CNOT3O75175 753 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 ALOX12BO75342 701 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 ZBTB11O95625 1053 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 AHSGP02765 367 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 KLK3P07288 261 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 GSTM1P09488 218 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 OR56A5P0C7T3 313 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 ST6GAL1P15907 406 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 STMN1P16949 149 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 MSH3P20585 1137 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 TYK2P29597 1187 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 AKT1P31749 480 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 GSTM4Q03013 218 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 USP10Q14694 798 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 DBN1Q16643 649 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 CRB2Q5IJ48 1285 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 MROH9Q5TGP6 573 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 C1orf189Q5VU69 101 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 CUZD1Q86UP6 607 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 LPGAT1Q92604 370 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 KCNJ9Q92806 393 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 RMDN2Q96LZ7 410 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 MCMBPQ9BTE3 642 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 UNKQ9C0B0 810 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 ACTR5Q9H9F9 607 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 SNX15Q9NRS6 342 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 TAS2R13Q9NYV9 303 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 MID2Q9UJV3 735 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 F8P00451 2351 aa11.32□□□□□ -0.6
CSNK1E-212ENST00000494610 CNTRLQ7Z7A1 2325 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 KLHL33A6NCF5 533 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 BTN3A3O00478 584 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 KPNA5O15131 536 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 GLRA3O75311 464 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 KLF7O75840 302 aaPredicted RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 GSTA1P08263 222 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 RAB40ALP0C0E4 278 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CBSLP0DN79 551 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 COL6A2P12110 1019 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 PKMP14618 531 aaKnown RBP11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 VCLP18206 1134 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CDH3P22223 829 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CBSP35520 551 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 SLC26A3P40879 764 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 CCNFP41002 786 aa11.31□□□□□ -0.6
CSNK1E-212ENST00000494610 SKIV2L2P42285 1042 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms