RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 MYL3P08590 195 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 FBP1P09467 338 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 ARSBP15848 533 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 ZNF8P17098 575 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 PAICSP22234 425 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 UBA1P22314 1058 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 MGAT1P26572 445 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 RYKP34925 604 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 GRK5P34947 590 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 EIF2S3P41091 472 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 ACTR1BP42025 376 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 ALDH3A2P51648 485 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 BCAR1P56945 870 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 CARD18P57730 90 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 TAS2R60P59551 318 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 YWHAZP63104 245 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 CYP24A1Q07973 514 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 GRM4Q14833 912 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 CHRNA6Q15825 494 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 SUPT20HL1Q3ZLR7 823 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 PAN2Q504Q3 1202 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 SGO1Q5FBB7 561 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 ZNF484Q5JVG2 852 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 MEDAGQ5VYS4 303 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 FRMPD2BQ6IN97 320 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 PSRC1Q6PGN9 363 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 DARS2Q6PI48 645 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 CNSTQ6PJW8 725 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 ENOSF1Q7L5Y1 443 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 OTOP1Q7RTM1 612 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 KRT25Q7Z3Z0 450 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 KIAA0907Q7Z7F0 614 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 ERO1BQ86YB8 467 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 NKAIN4Q8IVV8 208 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 ZNF444Q8N0Y2 327 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 SYNPOQ8N3V7 929 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 Q8NFD4 153 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 OR5T2Q8NGG2 359 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 TMC2Q8TDI7 906 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 SLC22A18Q96BI1 424 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 REPS1Q96D71 796 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 MYRFLQ96LU7 910 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 CCDC74BQ96LY2 380 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 GPR137Q96N19 417 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 SLITRK1Q96PX8 696 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 AGAP2Q99490 1192 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 DPYSL5Q9BPU6 564 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 RBM4BQ9BQ04 359 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 ATG101Q9BSB4 218 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 SOX7Q9BT81 388 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 RBM4Q9BWF3 364 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 TEKT3Q9BXF9 490 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 MRPL4Q9BYD3 311 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 NKX6-2Q9C056 277 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 MED28Q9H204 178 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 DDX31Q9H8H2 851 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 XPNPEP3Q9NQH7 507 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 AGPAT3Q9NRZ7 376 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 RBAKQ9NYW8 714 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 UBP1Q9NZI7 540 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 DNAJB11Q9UBS4 358 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 SEPT9Q9UHD8 586 aaPredicted RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 PURGQ9UJV8 347 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 RUVBL2Q9Y230 463 aaKnown RBP3.94□□□□□ -1.78
ATG3-207ENST00000494571 DLGAP4Q9Y2H0 992 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 PCDHB5Q9Y5E4 795 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 PPP2R3BQ9Y5P8 575 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 PTCH2Q9Y6C5 1203 aa3.94□□□□□ -1.78
ATG3-207ENST00000494571 LOC100130705A0A1B0GUX0 176 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SYNDIG1LA6NDD5 238 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 URADA6NGE7 173 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 WASLO00401 505 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 PDXKO00764 312 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ABCD4O14678 606 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 BCKDKO14874 412 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 UBDO15205 165 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 KIAA0513O60268 411 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TRIM13O60858 407 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MITFO75030 526 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 DDAH1O94760 285 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 TGM6O95932 706 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GP1BAP07359 652 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 ANXA6P08133 673 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 POU3F2P20265 443 aaPredicted RBP3.93□□□□□ -1.78
ATG3-207ENST00000494571 CYP7A1P22680 504 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CD6P30203 668 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SFNP31947 248 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GKP32189 559 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GRIA4P48058 902 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PIK3CGP48736 1102 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 SUOXP51687 545 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GABARAPL2P60520 117 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PSMC6P62333 389 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 IRF9Q00978 393 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 MC2RQ01718 297 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PPP3CAQ08209 521 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 CRHR2Q13324 411 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 PUM1Q14671 1186 aaKnown RBP eCLIP3.93□□□□□ -1.789e-8■■□□□ 13
ATG3-207ENST00000494571 COL28A1Q2UY09 1125 aa3.93□□□□□ -1.78
ATG3-207ENST00000494571 GTDC1Q4AE62 458 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms