RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ARFIP1P53367 373 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SRP54P61011 504 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 STX1BP61266 288 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 UFM1P61960 85 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 RELAQ04206 551 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PRDX1Q06830 199 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 EIF2B5Q13144 721 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 PRKG2Q13237 762 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 CEACAM7Q14002 265 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SIM2Q14190 667 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 FZD2Q14332 565 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 ALG11Q2TAA5 492 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 TRMT5Q32P41 509 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 XKR6Q5GH73 641 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 IRAK1BP1Q5VVH5 260 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 REP15Q6BDI9 236 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 IYDQ6PHW0 289 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 DOK6Q6PKX4 331 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 CYP20A1Q6UW02 462 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SCIMPQ6UWF3 145 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SUSD1Q6UWL2 747 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 ENPP7Q6UWV6 458 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 DLEU7Q6UYE1 221 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 BNC2Q6ZN30 1099 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 Q6ZSR6 202 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MSANTD1Q6ZTZ1 278 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 CHST15Q7LFX5 561 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 VN1R5Q7Z5H4 357 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 CAMKMTQ7Z624 323 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 FAM124AQ86V42 546 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MYLK4Q86YV6 388 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 C10orf67Q8IYJ2 551 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 DEFB107AQ8IZN7 70 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SNX31Q8N9S9 440 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MFSD2AQ8NA29 543 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 FNDC5Q8NAU1 212 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PCYOX1LQ8NBM8 494 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PPFIBP2Q8ND30 876 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 TSTD1Q8NFU3 115 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PJA1Q8NG27 643 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 DNAJB8Q8NHS0 232 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 FLVCR1-AS1Q8TAF5 88 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SLC5A11Q8WWX8 675 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SELENOMQ8WWX9 145 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 DNASE2BQ8WZ79 361 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SMPDL3AQ92484 453 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 UBE2E3Q969T4 207 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 RCN3Q96D15 328 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 REPS1Q96D71 796 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SPDL1Q96EA4 605 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 DUS3LQ96G46 650 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 PDXPQ96GD0 296 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 APIPQ96GX9 242 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MARK4Q96L34 752 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 THTPAQ9BU02 230 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 RAB11FIP5Q9BXF6 653 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MRPL1Q9BYD6 325 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 ELOVL6Q9H5J4 265 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 WDR41Q9HAD4 459 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MRPL40Q9NQ50 206 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 CCDC177Q9NQR7 707 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 OR6C2Q9NZP2 312 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SCHIP1Q9P0W5 487 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 ZNF624Q9P2J8 865 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 VPS29Q9UBQ0 182 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 TBC1D29Q9UFV1 150 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 CA14Q9ULX7 337 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SH2B3Q9UQQ2 575 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 POMPQ9Y244 141 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 EIF3LQ9Y262 564 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 MAN2B2Q9Y2E5 1009 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 WBP11Q9Y2W2 641 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 NEUROG3Q9Y4Z2 214 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PCDHA9Q9Y5H5 950 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 HEBP2Q9Y5Z4 205 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PLXND1Q9Y4D7 1925 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 IGKV1-8A0A0C4DH67 115 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 OR5K4A6NMS3 321 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 MAGEB17A8MXT2 336 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 H0YHG0 523 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 MRASO14807 208 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 FFAR3O14843 346 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 AIM2O14862 343 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 GPR42O15529 346 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TNFSF14O43557 240 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TBX19O60806 448 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SEMA3DO95025 777 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 ETHE1O95571 254 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 EML2O95834 649 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 CAPNS1P04632 268 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 IL6P05231 212 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SLC35G4P0C7Q5 338 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 TDGF1P13385 188 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 F3P13726 295 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 HSD17B1P14061 328 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SLC2A4P14672 509 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 SLC6A2P23975 617 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 HRH2P25021 359 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 CXCR2P25025 360 aa6.54□□□□□ -1.36
MSH5-217ENST00000494458 VARSP26640 1264 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms