RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SLC38A9Q8NBW4 561 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 NLGN4YQ8NFZ3 816 aaPredicted RBP8.43□□□□□ -1.06
ITGB1-217ENST00000494395 OR2L3Q8NG85 312 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 OR1L3Q8NH93 324 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 ZNF480Q8WV37 535 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 SLC22A18Q96BI1 424 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 RNF31Q96EP0 1072 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 TCTN2Q96GX1 697 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 PDLIM5Q96HC4 596 aaKnown RBP8.43□□□□□ -1.06
ITGB1-217ENST00000494395 ELMO2Q96JJ3 720 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 FRMD6Q96NE9 622 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 GPR22Q99680 433 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 RBBP8Q99708 897 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 CPNE1Q99829 537 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 SLC12A9Q9BXP2 914 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 FUT8Q9BYC5 575 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 CPNE5Q9HCH3 593 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 SYTL2Q9HCH5 934 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 SOHLH2Q9NX45 425 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 NINJ2Q9NZG7 142 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 IKZF3Q9UKT9 509 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 SLC39A10Q9ULF5 831 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 PDE10AQ9Y233 779 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 MTO1Q9Y2Z2 717 aaKnown RBP8.43□□□□□ -1.06
ITGB1-217ENST00000494395 MGAQ8IWI9 3026 aa8.43□□□□□ -1.06
ITGB1-217ENST00000494395 NBEAQ8NFP9 2946 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 IGKV1-8A0A0C4DH67 115 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 OR2A25A4D2G3 310 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 TARM1B6A8C7 271 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 TMEM150CB9EJG8 249 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 SLC16A5O15375 505 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 NRP2O60462 931 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 C8GP07360 202 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 LIFP15018 202 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 F8A1P23610 371 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 MAP4P27816 1152 aaKnown RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 STX2P32856 288 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 RORAP35398 523 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 GP5P40197 560 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 GRIA3P42263 894 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ARL4DP49703 201 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 CSRP3P50461 194 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 PNLIPRP1P54315 467 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 IL2P60568 153 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 YBX1P67809 324 aaKnown RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 POU4F1Q01851 419 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ILF2Q12905 390 aaKnown RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 NAB1Q13506 487 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ZNF460Q14592 562 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ZKSCAN8Q15776 578 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 PPP1R3AQ16821 1122 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ZXDCQ2QGD7 858 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 DEFB110Q30KQ9 67 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ZNF385CQ66K41 422 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 FIGLAQ6QHK4 219 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 SUSD1Q6UWL2 747 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 MBOAT1Q6ZNC8 495 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 MYO1HQ8N1T3 1032 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ESX1Q8N693 406 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 GALNT6Q8NCL4 622 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ANKRD49Q8WVL7 239 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 SMPDL3AQ92484 453 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ANKRD7Q92527 254 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 CDKL2Q92772 493 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 LINGO1Q96FE5 620 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 LRFN5Q96NI6 719 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 ZNF285Q96NJ3 590 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 FMO2Q99518 471 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 MIPEPQ99797 713 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 AKIRIN1Q9H9L7 192 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 PARVBQ9HBI1 364 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 POPDC3Q9HBV1 291 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 SLC6A20Q9NP91 592 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 STOX2Q9P2F5 926 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-217ENST00000494395 KLHL20Q9Y2M5 609 aa8.42□□□□□ -1.06
ITGB1-217ENST00000494395 CCDC88CQ9P219 2028 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 HMX2A2RU54 273 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 ZBTB14O43829 449 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 ZNF500O60304 480 aaPredicted RBP8.41□□□□□ -1.06
ITGB1-217ENST00000494395 CTSVO60911 334 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 SCRG1O75711 98 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 FAM155BO75949 473 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 HSD17B2P37059 387 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 ITGA1P56199 1179 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 CXADRP78310 365 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 GPS2Q13227 327 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 SF1Q15637 639 aaKnown RBP8.41□□□□□ -1.06
ITGB1-217ENST00000494395 MANEAQ5SRI9 462 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 GRTP1Q5TC63 336 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 ZNF425Q6IV72 752 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 SBSNQ6UWP8 590 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 C6orf15Q6UXA7 325 aaPredicted RBP8.41□□□□□ -1.06
ITGB1-217ENST00000494395 CCDC81Q6ZN84 652 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 RNF44Q7L0R7 432 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 TMEM126BQ8IUX1 230 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 RAB42Q8N4Z0 105 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 IL22RA1Q8N6P7 574 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 PPFIBP2Q8ND30 876 aa8.41□□□□□ -1.06
ITGB1-217ENST00000494395 MCOLN3Q8TDD5 553 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms